Gene Rmar_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2278 
Symbol 
ID8568943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2649780 
End bp2651081 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content65% 
IMG OID 
ProductTRAP dicarboxylate transporter, DctM subunit 
Protein accessionYP_003291545 
Protein GI268317826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTGGA TCGCCGTCCT GATTCTGGTC GTCTCCTTTG CGGTGCTGTT GCTGCTGGGT 
GTGCCGATCG CGGTCTGCAT CGGGCTGGCC ACGATCCTGA CCATGCTGCC GAGCATGCCG
CTGGCCCCGG CGCTGACCAC CGAGGCGCAG CGCATCGCCA CCGGACTCGA TTCGTTCACG
CTGCTGGCCA TTCCGTTTTT CATTCTGGCG GGGCATCTGA TGAACCGGGG CGGCATTGCC
CGGCGACTGG TGAACTTCGC CGAAGCGGCG CTGGGTATGC TGCCGGGGGC GCTGGCGCAC
GTGAACATCC TGGCGGCCAT GCTCTTCGGA GCGATCTCGG GTTCGGCGGC GGCCGCCGCC
TCGGCCATCG GCAGCATCAT GGCGCCGCAC ATGGAGCGCG AGGGATATGA CAAGGGCTAC
AGTGTGGCGG TCAACGTCAC CTCGGCCACC ACCGGCCTGC TCATTCCACC CAGCAACATC
CTGATCGTCT ATTCGCTGGC CTCGGGCGGT ACGTCGATCG CCGCGCTGTT TCTGGCGGGC
TACATCCCGG GCATTCTTGT CGGTCTGATG CTCATGCTGG TGGCCGGCTG GATCGCCTGG
AAGCGGCGCT ACCCGGTGGC CGGTCGGCCC AGCCTCCGCC GTCTATGGAG CACGTTCTGG
GACGCTGCCC CCAGCCTGCT GCTGCTGGTG ATCGTGATCG GCGGCATCAT CGCGGGCATC
TTCACAGCCA CCGAGGCTGC CGCCGTGGCC GTGCTCTACG CGCTGATTCT GGCGCTGCTC
TACCGCGAGT TGCGGCTGCG GGATCTACCC CGCGTGCTGC TCGAAGCTTC TTCCACGACC
GCCATCGTGC TGCTGCTCAT CGCCACCTCG ATGGCCATGT CGTGGATCCT GGCCTACGAG
CAGATTCCCC AGGGCGTCAG CCAGGCGCTG CTGGCCCTGA CCGACAACAA GATCCTGATT
CTGCTGATCA TCAACTTCGT GCTGCTGGCC GTCGGGACGT TCATGGACAT GACGCCCGCC
GTGCTGATTT TCACCCCGAT CTTTCTGCCG GTGGCGCTGA ACCTGGGCAT CGATCCCATT
CACTTCGGGA TCATCCTGGT GCTCAATCTC TGCATCGGAC TCTGCACGCC GCCCGTGGGG
ACCGTGCTGT TCGTGGGACT GGGCGTGACG CAGACGCCCA TGACGCGCGT GCTGCGCTCG
CTCTTGCCCA TGTACGCGGC GATGATCATC GCACTGCTGC TGGTGACGTA CCTGCCGGAG
CTGAGCCTCT GGCTGCCTCG TGTCTTTGGA TACCTCGAAT AA
 
Protein sequence
MEWIAVLILV VSFAVLLLLG VPIAVCIGLA TILTMLPSMP LAPALTTEAQ RIATGLDSFT 
LLAIPFFILA GHLMNRGGIA RRLVNFAEAA LGMLPGALAH VNILAAMLFG AISGSAAAAA
SAIGSIMAPH MEREGYDKGY SVAVNVTSAT TGLLIPPSNI LIVYSLASGG TSIAALFLAG
YIPGILVGLM LMLVAGWIAW KRRYPVAGRP SLRRLWSTFW DAAPSLLLLV IVIGGIIAGI
FTATEAAAVA VLYALILALL YRELRLRDLP RVLLEASSTT AIVLLLIATS MAMSWILAYE
QIPQGVSQAL LALTDNKILI LLIINFVLLA VGTFMDMTPA VLIFTPIFLP VALNLGIDPI
HFGIILVLNL CIGLCTPPVG TVLFVGLGVT QTPMTRVLRS LLPMYAAMII ALLLVTYLPE
LSLWLPRVFG YLE