| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2202 |
|---|
| Symbol | |
|---|
| ID | 8568865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2563228 |
|---|
| End bp | 2564805 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003291469 |
|---|
| Protein GI | 268317750 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATATCT ACCGCAGCCC GTTTCCCGAT GTGGAAATTC CGGAAATCCC GCTGCCGGAG
ATGGTTTTTC GGCGGGTGGA CGAACATCCG GACAAGCCGG CGCTCATCGA AGGGCTGACC
GGACACACGC TCACCTACGC GCAGCTCCGC GAGCAGGCGC GCGCCTTTGC GGCCGGACTG
GCCGCCCGGG GTTTCCGCAA GGGCGACTTG CTGGCCCTCT ACAGTCCCAA CCTGCCGGAG
TACGCCGTGG TCTTCTACGG GGTGGCGATG GCCGGTGGCA TCACGACGAC GGTCAACCCG
CTCTACACGG TCGATGAACT GGCGCACCAG CTGGAAGACG CCGGGGCGCG ATTTCTGGTG
ACGTTCCCGC TGTTTCTGGA GAATGCGCGG GCGGCGGCCG AACGCGCCGG TGTGGAGGAG
GTGATCGTGA TCGGCGAAGC CGACGGGGCC ACGCCGCTGG CCGAACTGCT GCAGCACGGG
ACCGAACCGC CGGCCGTGGA CATCAACCCG CGCGAAGACC TCGTCGTGCT GCCGTACTCG
AGCGGCACCA CGGGGCGTCC CAAGGGCGTC ATGCTCACGC ACTACAACAT CGTGGCGAAC
ATCGCCCAGA CGCTGGCCGT CGAGCAGTTT GAGGACGACG AAGTGCTCAT CGGCATTCTG
CCGTTTTACC ACATCTACGG CATGACGGTC ATCATGAGCA TGGCGCTGCA TGCGGGGGCC
ACGGTGGTGA CCATGCCGCG TTTCGATCTG GAGCAGTTTC TGGAATTGCT CCAGCGCTAC
CGGATCACCA CGGCCTTTCT GGTGCCGCCC ATCATCCTGG CGCTGGCCAA ACATCCGCTG
GTGGACCGGT ACGATCTCTC CAGCCTGCGC TACGTCAACT CCGGTGCGGC CCCGCTGCCC
GAGCCGGTGG CCCGCCAGTG CGCCGAGCGG CTGAACGTGA CGGTGCGGCA GGGCTATGGC
ATGACCGAAA CGAGTCCGGT GACGCACTTC ACGCCCCGCG GCTTTCCGAT TAAGCTCTCG
TCGGTGGGCG TGGCCGTGCC GAACACGGAA TTCCGGATCG TCGATGTGGC CACGCACGAA
GACGTGCCCG AGGGCGAAAC GGGCGAGCTG TGGATCCGCG GCCCGCAGGT CATGAAGGGC
TACTGGAAGA ATCTGCAGGC CACGCGCGAC ACGCTCGACG AGGAGGGCTG GCTGCACACG
GGCGACGTGG CCCGTGTGGA CCAGGACGGC TACCTGTACA TCGTCGATCG CGTCAAGGAG
CTGATCAAGT ACAAGGGCTA TCAGGTGGCC CCGGCCGAGC TGGAGGAGAT CCTGCAGGGG
CATCCGGCCG TGGCCGACGT GGCCGTCGTG CCGAGCCCCG ACGAAGAGGC GGGTGAGGTG
CCCAAGGCCT ACGTGGTGCT CAAGCCCGGC ATGCAGGCCA CGGCCGAAGA ACTGATGGCC
TACGTGGCCG AGCGGGTGGC GCCGTACAAG AAGATCCGGC GCGTGGAATT CGTCGATCAG
ATTCCCAAGA CGCTGTCGGG TAAGATCCTG CGGCGGGAAC TGGTCAAGCG CGAACGTGAG
ATTGCCGGAT TGTCGTGA
|
|---|
| Protein sequence | MHIYRSPFPD VEIPEIPLPE MVFRRVDEHP DKPALIEGLT GHTLTYAQLR EQARAFAAGL
AARGFRKGDL LALYSPNLPE YAVVFYGVAM AGGITTTVNP LYTVDELAHQ LEDAGARFLV
TFPLFLENAR AAAERAGVEE VIVIGEADGA TPLAELLQHG TEPPAVDINP REDLVVLPYS
SGTTGRPKGV MLTHYNIVAN IAQTLAVEQF EDDEVLIGIL PFYHIYGMTV IMSMALHAGA
TVVTMPRFDL EQFLELLQRY RITTAFLVPP IILALAKHPL VDRYDLSSLR YVNSGAAPLP
EPVARQCAER LNVTVRQGYG MTETSPVTHF TPRGFPIKLS SVGVAVPNTE FRIVDVATHE
DVPEGETGEL WIRGPQVMKG YWKNLQATRD TLDEEGWLHT GDVARVDQDG YLYIVDRVKE
LIKYKGYQVA PAELEEILQG HPAVADVAVV PSPDEEAGEV PKAYVVLKPG MQATAEELMA
YVAERVAPYK KIRRVEFVDQ IPKTLSGKIL RRELVKRERE IAGLS
|
|---|
| |