Gene Rmar_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2194 
Symbol 
ID8568857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2554987 
End bp2556390 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content61% 
IMG OID 
ProductL-lysine 6-transaminase 
Protein accessionYP_003291461 
Protein GI268317742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGGT TTTCGTATTT TGCAAAAAAC AACGTCGTGG AAAACGGAAG GGAGTGCCTT 
ATGGAGCATG TGACCATGCA GCAGATTACT CCGGAAATGG TGCGGCCCAT CCTGGCCCGC
CACCTGCTGA CCGACGGGTT GCCGATCGTG CTCGACATGG AGCGGAGTCA GGGGGTGCAT
CTGTACGATC AGCTTACCGG CCGTGAGTTG ATCGACTTTT TCGGCTTTTT TGCCTCGAGC
GCGGTCGGGA TGAATCATCC CAAAATGCTC GGCGACGAGG ACTTCAAGAA GCGCCTGATG
GAGGCCGCCC TGAACAAGGT GACGAACTCG GACATCTACA CAGTGCACAT GGCCCGATTC
GTCCAGACCT TCGAGCGGGT GGGCATTCCG GATTACCTGC CTTATGCCTT TTTCATCGAC
GGCGGCGCGC TGGCCGTGGA GAATGCGCTC AAGGCGGCCT TCGACTGGAA AGTCCGCAAA
AACTTCCGGA AAGGCTACCG TCGCGAAGTG GGCCACCGGG TGCTGCACTT CGACCAGGCG
TTCCACGGGC GCACCGGCTA TACGCTTTCG CTGACGAACA CCTTCGATCC GCGCAAGACC
CAGTATTTCC CGAAGTTCGA CTGGCCGCGC GTCATCAATC CGAAACTCAC GTTCCCGCTC
ACCGAGGAAA ACCTGGAGCG CACGATCGAG CTGGAGCAAC TGGCCATTCG CCAGGCCAAG
CAGTACTTTT ACGAATACAA AGACGACATC GCCTGCATCA TCATCGAGCC CATTCAGGCC
GAAGGCGGCG ACAATCACTT CCGGCCCGAG TTCCTGAAGG CGCTCCGGGA GCTGGCCGAC
GAAAACGACG CGTTGCTGAT CTTCGACGAG GTGCAGACGG GCGTCGGCAT CACGGGTGCC
TTCTGGGCGC ATCAGGTGCT CGGTGTGCAG CCCGACATCA TTGCCTTTGG CAAAAAGACC
CAGGTGTGCG GCATTCTGGC CGGGCGGCGG CTGGACGAAG TGGAAGACAA CGTCTTCCAT
GTGTCGAGCC GACTGAACTC CACCTGGGGC GGCAACCTGG CCGACATGGT CCGCTTCGAT
CGGATTCTGG AAATCATCGA AGAAGATCGG CTTGTGGAAA ATGCCGCCCG GGTGGGCGCC
TACCTGCTGC GTCGGCTGGA GGAGATGGCC GAGGCGCTGC CGTTCATGAC CAACGTGCGC
GGGCGCGGGC TCATGTGTGC CTTCGATCTG CCCACCCCGG CCTTCCGGGA TGCCGTGCGC
CAGCGGAGCC TGGAAGAGGG CGTTCTGGTG CTGGGCTGTG GCGAGCGCTC GATCCGCTTC
CGTCCGCCGC TGATCATCAC GGAAGCCGAG ATCGACGAAG GGCTTCGCCG GTTGCGCCGG
GCACTGGAGT ACGTGGCCCG TTAG
 
Protein sequence
MFRFSYFAKN NVVENGRECL MEHVTMQQIT PEMVRPILAR HLLTDGLPIV LDMERSQGVH 
LYDQLTGREL IDFFGFFASS AVGMNHPKML GDEDFKKRLM EAALNKVTNS DIYTVHMARF
VQTFERVGIP DYLPYAFFID GGALAVENAL KAAFDWKVRK NFRKGYRREV GHRVLHFDQA
FHGRTGYTLS LTNTFDPRKT QYFPKFDWPR VINPKLTFPL TEENLERTIE LEQLAIRQAK
QYFYEYKDDI ACIIIEPIQA EGGDNHFRPE FLKALRELAD ENDALLIFDE VQTGVGITGA
FWAHQVLGVQ PDIIAFGKKT QVCGILAGRR LDEVEDNVFH VSSRLNSTWG GNLADMVRFD
RILEIIEEDR LVENAARVGA YLLRRLEEMA EALPFMTNVR GRGLMCAFDL PTPAFRDAVR
QRSLEEGVLV LGCGERSIRF RPPLIITEAE IDEGLRRLRR ALEYVAR