Gene Rmar_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2192 
Symbol 
ID8568855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2552011 
End bp2554572 
Gene Length2562 bp 
Protein Length853 aa 
Translation table11 
GC content64% 
IMG OID 
ProductDNA gyrase, A subunit 
Protein accessionYP_003291459 
Protein GI268317740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCAG AAAAACCTCG CATTATTCCT GTCAATATTG AGGAGGAAAT GAAATCCTCC 
TACATCGACT ATTCCATGTC GGTGATTGTG GGCCGGGCGT TGCCGGACGT ACGCGACGGG
CTCAAGCCGG TTCATCGCCG CGTGCTTTAC GGCATGTACG AGCTCGGCCT GACGGCCAGC
GCCCCTTACA AGAAAAGCGC CCGTATCGTC GGCGAGGTGC TCGGTAAGTA CCACCCGCAC
GGCGACGCGG CCGTCTACGA CACGATGGTG CGTATGGCGC AGGACTTCGC CATGCGCTAT
CCGCTGGTCG ACGGCCAGGG CAACTTCGGC TCGATCGACG GCGACAGTCC CGCCGCCATG
CGCTACACGG AGGCGCGCCT GACGCGCCTG GCCGAAGAAA TGCTGCGGGA CATCGACAAG
GACACCGTCG ATTTTCAGGA CAACTTCGAC GGCTCCCTGA AGGAGCCGGT CGTGTTGCCG
GCCGCCCTGC CCAATCTGAT CGTCAACGGC GCCGACGGCA TCGCTGTGGG CATGGCCACC
AAGATCCCTC CGCACAACCT GGGCGAGGCC GTCGATGCGC TCGTGGCCAT GATCGACAAC
CCGGACATCT CGCTGGACGA GCTGCTGAAG CATCTTCCGG CACCGGACTT CCCCACGGGC
GGCATCATCT ATGGCTACAG CGGGGTGAAA GAGGCCTACG CGACCGGCCG CGGCCGCATC
CTGATCCGCG CACGCATCCA CGAAGAGGAG ATCCGGCCGG GCCGCATGGC GCTCGTCATC
ACGGAAATCC CCTATCAGGT CAACAAAAGC AGCCTGATCG AGAAGATCGC GCATCTGGTG
CGGGAGCGCC GCATTGACGG CATCACAGAC ATCCGGGATG AAAGCGACCG CGAAGGCCTG
CGCGTCGTGC TGGAGCTGCG CAAAGACGCC GTGCCGCTGG TCATTCAGAA CCAGCTCTAC
AAGTACACGC CCTGCCAGCA GACCTTCGGC GTGAACATGG TGGCGCTGGT GAACGGCCGG
CCGCGCACGC TCACGCTCAA AGAACTGATG CGCCATTACC TGGATCACCG GCACGAGGTC
GTAACGCGGC GCACCCGCTT CGAACTGCGT AAGGCCGAGG AGCGTGCCCA CATCCTGGAA
GGCCTCAAGA TCGCGCTCGA TCACCTCGAC CTCGTCATCA ACATCATTCG CTATTCGGCC
GACCCGGACG AAGCGCGCCA GCGCCTCATG GAAGGCGTGC TGCCTGAACG GCTCACGCCG
GAGCAACGGG AGCGGCTGGG GTTGCCCGTC GAGCAGATTT CGCATTTCAC GCTCACCGAG
GCGCAGGCCA ATGCGATCCT TGCCCTCCGA CTGAGCCGCC TGACCGGCCT CGAGCGCCAG
AAGCTCGAAG AAGAATACCG GGCGCTGCTC CAGGAAATCG AGCGCCTGCG GAGCATCCTG
GCCAGCGAGC CGTTGCGCTG GCAGATCATC CGGGAAGAGC TGCTCGAGCT GAAGCAGAAG
TATGCCGACG CGCGGCGTAC GGAGATCGAC TATGCGGGCG GCGGCGACTT TGCCATCGAG
GACCTGATCG AAGACGAGCA GGTGGTGGTC ACGCTGTCGC ACCAGGGACT GATCAAACGC
ACGCCGGTTC ACATCTACCG GCAACAGGGC CGCGGCGGCG TCGGCATGAA GGCCAGCGGC
ATGCGCGAAG ACGACTACAT CGAACACCTG TTCGCCTGCA AGAACCACGA TTACCTGCTC
TTTTTCACGG ACCACGGCCG CTGCTACTGG CTGCGCGTTT ACGACATCCC GGAGGGCAGC
CGCACCAGCC TCGGCCGCTC CATTCGCAAC CTGATCCAGA TTGCGCCCGA CGATCGCGTG
CGCGCCGTGC TGAACATCCG CAAGGAGGAC TTCGAAAATC CGGAATTCCT GCGCACGCAC
TACGTGCTGA TGGCCACGCG CCAGGGTCTT GTCAAGAAGA CGGAGCTGGA AGCCTTCAGC
CGTCCGCGGG CCGACGGCAT CATCGCCATT GCCTTTGCTG AAGGGGACGA GCTGATCGAA
GCGGTGCTGA CCGACGGCCG GGCGCACGTG CTGCTGGCCT CGTCGGGCGG ACGCGTCGTG
CGCTTCGATG AATCGGACGT GCGGCCGATG GGCCGCAACA CGCGCGGCGT ACGGGGCATT
GCGCTGGAGA CCGGCGAACA GGTCGTGGGC ATGGTGGCCG TCTCGCCCGA AGCCTCGCCC
TGCATTCTGT CGATCAGCGC CAACGGCTAC GGCAAGCGCA CGCCGCTGGA AGAGTATCCC
GTCCACCGGC GGGGCGGCAA GGGCGTCTGG ACCATGAAGA TCACGCCGCG TACGGGCCGA
CTCATCGCCA TCAAGGCCGT GCAGGACACC GACGATCTGA TGATCATCAC CCAGAACGGC
CTGATGATCC GCATCCACGT GGCCGACATC AGCCGTATGG GTCGGCACAC CCAGGGCGTC
CGGCTGATCC AGCTCAAGCC CGGCGATGCC ATTGCCGACG TGACACGCCT GGTCACCGAA
GCCCAGGAAG ACGAAGCGGC CGCCGCACCG GCCATCGCCT GA
 
Protein sequence
MEAEKPRIIP VNIEEEMKSS YIDYSMSVIV GRALPDVRDG LKPVHRRVLY GMYELGLTAS 
APYKKSARIV GEVLGKYHPH GDAAVYDTMV RMAQDFAMRY PLVDGQGNFG SIDGDSPAAM
RYTEARLTRL AEEMLRDIDK DTVDFQDNFD GSLKEPVVLP AALPNLIVNG ADGIAVGMAT
KIPPHNLGEA VDALVAMIDN PDISLDELLK HLPAPDFPTG GIIYGYSGVK EAYATGRGRI
LIRARIHEEE IRPGRMALVI TEIPYQVNKS SLIEKIAHLV RERRIDGITD IRDESDREGL
RVVLELRKDA VPLVIQNQLY KYTPCQQTFG VNMVALVNGR PRTLTLKELM RHYLDHRHEV
VTRRTRFELR KAEERAHILE GLKIALDHLD LVINIIRYSA DPDEARQRLM EGVLPERLTP
EQRERLGLPV EQISHFTLTE AQANAILALR LSRLTGLERQ KLEEEYRALL QEIERLRSIL
ASEPLRWQII REELLELKQK YADARRTEID YAGGGDFAIE DLIEDEQVVV TLSHQGLIKR
TPVHIYRQQG RGGVGMKASG MREDDYIEHL FACKNHDYLL FFTDHGRCYW LRVYDIPEGS
RTSLGRSIRN LIQIAPDDRV RAVLNIRKED FENPEFLRTH YVLMATRQGL VKKTELEAFS
RPRADGIIAI AFAEGDELIE AVLTDGRAHV LLASSGGRVV RFDESDVRPM GRNTRGVRGI
ALETGEQVVG MVAVSPEASP CILSISANGY GKRTPLEEYP VHRRGGKGVW TMKITPRTGR
LIAIKAVQDT DDLMIITQNG LMIRIHVADI SRMGRHTQGV RLIQLKPGDA IADVTRLVTE
AQEDEAAAAP AIA