Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2188 |
Symbol | |
ID | 8568851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 2546617 |
End bp | 2548659 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003291455 |
Protein GI | 268317736 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGCG TTCTGTTCTG GCTCGCGCTG GGCCTGAGTC TGTGGCTCCG GAATGCTCTG GCGCAGGAGC GTCCGTTGCC GCGCTTCCGC ACGCAGCAGG ACAGCCTCAC CGTCTTTCAG TTGCCGCCCG TGCTGGTCGA AGCCACGCGC GGATTTACGG CCCCATGGGG CGAGGCGCTT CCCCTGCTCA CGCTGGAGCG CCGGCCGCCC GAGGTGCAAT TCCGTCCGGC ACTGACGCTG ACCGAGACGT TGCGCGAACT GCCCGGTCTC TGGCTCAACG ATCGCCAGAA CTATGCGCTG GGCGAGCGGC TGCTCGTGCG CAGTGCCGGC TGGCAGGCCG CCTTCGGCGT GCGCGGCGTG CAGGTCGTGC TCGACGGCAT TCCGCTGACC ATGCCCGACG GCCAGGCCGT GCTCGACCCG GTCGATCCGG CTTTCATCCG CCGTGCCGAG CTGCTGCGCG GCCCGGCCGC GCTGTTCTGG GGCAACGGCA GCGCCGGGGC CCTGGTGCTC TCGACCTGGC CCGAGCCGAT TCGCCCCGGT CTGCGCGTTC GTCTGCTGGG GGGCAGCTAT GGCCTGCGTC GTCTGGGCGG CGAGGCCGTG CTGCGCGCCG GCCCGCACGC GCTGGCCTTC CACGCCTCGC ACCTGGAGCA GGAAGGCTAC CGGGCCCATA GCCAGACCCG TCTGAGCCGT TTCGGTCTGC AGGCCGGCGT TCGGCTGGAC GCCCGCACGC GCCTGCGGGT CACGCTGGCC GGCTCCTGGC TGAATGCCCG GCATCCGGGC GCCCTGACGG CCGACGAACT GGACCGCGAT CCACGCCAGG CCAGTGCCCG CTACGTGGCC ACCCGTGCCG GCAAAGACAG CCGGCAGGGG CAGCTCGGCG CGACCTTCGT CCACCGGCTG CCCGAAGGCT GGCTGACGTT CACCACCTTC GCGCTGGTGC GCCATCTGGA CAATCCTCTG CCCTTTGCCT ACATCCGCCT GCGGCGCCAG GCCGCCGGAA TACGCACGAC CTGGACGCAG GAGCGCGGCC GCTGGCGCAC CGGCCTTGGA CTCGACGTCA CGCTGCAGGA CGACGACCGC CAGAACTTTC CCAACGACAA CGGCCGCCCC GGCACGCCGC GCCTGCTTGA CCAGCGCGAG CGCGTCGGTG AACTGGCGCT GTTCGGTCTG GCGCGCTATG CCTTCACGCC GCGCCTGCAG GCGCTCGCCG GCCTGCGCCT GAGCTACCTG CACTTCGCCC TGACCGACTA CCTGCTCACC AACGGCGACC AGTCCGGCCG CCGCACGTTC AGCGTCTGGA CGCCCACGCT GGGCGTGGTT TACCGGGTGG CGTCCGGCAC GCAGCTTTTT GCCACGCTGG GCACGGCCTT CGAGTCGCCC ACCACGACCG AACTGGTCAA CCGTCCGGAC GGCCGGGGCG GTTTCAATCC CGAGCTGGAC CCGCAGTACC TCTACGGCAT CGAGCTGGGC GGCCGCCGCC GGGAAAGCAC CCTCCAGGCC GATCTGACGC TGTTCTACCA GTGGGTGCGC GGCCGCATCA TCCCCTTCCA GCTCGAAGGC GACGGCCGCA CCTTCTACCG CAACGCCGGC CGCACGCGCC AGTACGGAAT CGAACTCTGG CTGCAGGCAC GGCTGACGCC GGCGCTACAG GCCCGGCTGG CCTACACGGG CGCCCGCTAT CGGTTCGAGG AAGCCGAGCT CCGGGGCAAG CGCCTGCCCG GCCTGCCCGA ACAGCGCCTT GCGCTCACGC TGCAATACCG GAGAGGACCG CTCTGGCTGG AGACGACCGG CACGGCCGTG GGTCCCTGCT ATGCCGACGA TGCCAACACC GTGCGCGTGG ACGGCTACGT CACGGTGGAC GTTACGCTGG GACTGGCGCG CTCGCTGCTG CCCGGATTTG ACGTGCAACC GTTCGTCTCC GTGCAGAATG TGCTGGACCG ACGCTACGTG GGCTCCGTCG TGGTCAACGC AGGTGGCGGC CGCTATTTCG AACCCGCCGC CGGCCGCAGC GTTCGCTTCG GGCTGAATCT GCGCACCCCC TGA
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Protein sequence | MRRVLFWLAL GLSLWLRNAL AQERPLPRFR TQQDSLTVFQ LPPVLVEATR GFTAPWGEAL PLLTLERRPP EVQFRPALTL TETLRELPGL WLNDRQNYAL GERLLVRSAG WQAAFGVRGV QVVLDGIPLT MPDGQAVLDP VDPAFIRRAE LLRGPAALFW GNGSAGALVL STWPEPIRPG LRVRLLGGSY GLRRLGGEAV LRAGPHALAF HASHLEQEGY RAHSQTRLSR FGLQAGVRLD ARTRLRVTLA GSWLNARHPG ALTADELDRD PRQASARYVA TRAGKDSRQG QLGATFVHRL PEGWLTFTTF ALVRHLDNPL PFAYIRLRRQ AAGIRTTWTQ ERGRWRTGLG LDVTLQDDDR QNFPNDNGRP GTPRLLDQRE RVGELALFGL ARYAFTPRLQ ALAGLRLSYL HFALTDYLLT NGDQSGRRTF SVWTPTLGVV YRVASGTQLF ATLGTAFESP TTTELVNRPD GRGGFNPELD PQYLYGIELG GRRRESTLQA DLTLFYQWVR GRIIPFQLEG DGRTFYRNAG RTRQYGIELW LQARLTPALQ ARLAYTGARY RFEEAELRGK RLPGLPEQRL ALTLQYRRGP LWLETTGTAV GPCYADDANT VRVDGYVTVD VTLGLARSLL PGFDVQPFVS VQNVLDRRYV GSVVVNAGGG RYFEPAAGRS VRFGLNLRTP
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