Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2183 |
Symbol | |
ID | 8568846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 2538724 |
End bp | 2540646 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | chaperone protein DnaK |
Protein accession | YP_003291450 |
Protein GI | 268317731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.137108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGA TTATCGGCAT CGACCTGGGC ACGACGAACT CGGTGGTGGC CGTCATGGAA GGCGGCGAGC CCAAGGTGAT CATCAACCCG GAGGGCTCGC GGGTGACCCC CTCGGTGGTG GCCTTCACAG CGGACGGCGA GCGCCTCGTC GGCGCCCCGG CCAAGCGACA GGCCATTACG AACCCGAAAA ACACGATCTT CTCGATCAAG CGCTTCATGG GGCGCTTCTA CGACGAGGTG ACCGAGGAAA TCTCGATGGT GCCCTACAAG GTCGTTCGGG GTGAGAACAA CACGGTCCGC GTCGAGGTCG AGGTCGGCGG CGAAAAGCGC CTCTACACGC CGCAGGAGAT CTCGGCCATG ATTCTGCAGA AGCTGAAACA GACGGCCGAG GAATACCTGG GCGAGCCGGT GACCGAGGCG GTCATCACGG TGCCGGCTTA CTTCAACGAC GCGCAGCGGA AGGCCACGAA GGAAGCCGGT GAGATCGCCG GCCTGAAGGT GCGTCGGATT CTCAACGAGC CGACCGCTGC GGCCCTGGCC TACGGGCTGG ACAAGAAGGA CAAAGAACTC AAGATCGCCG TCTACGACCT CGGTGGCGGG ACCTATGATA TTTCGATCCT GGAGCTGGGC GATGGCGTCT TTGAGGTGAA GGCCACGAAC GGCGACACAC ACCTGGGCGG GGACAACTTC GACCAGCGGC TCATTGACTA CATCGCCGAC GAATTCCAGA AGCAGGAAGG CATCGACCTG CGGAAAGACC CCATGGCGCT GCAGCGGCTC AAGGAAGCGG CCGAAAAGGC CAAGATCGAG CTGTCCAGCG CCATGAAGAC CACGGTCAAC CTGCCGTTCA TCACGGCGAC GGCCGAAGGG CCCAAGCACC TGGTCATGGA GATCACGCGC GCCAAGTTCG AGCAGTTGAT CGAAGATCTG GTGGCGCGCA CGATCCCGCC CATGGAGCAG GCCCTCAAGG ACGCCAAGCT CCGCAAAGAG GACATTGACG AGGTCATCCT CGTCGGTGGT TCGACGCGGA TTCCGCTGGT GCAGCGGACC GTCGAAGAGT TCTTCGGCAA GAAGGCCAAC AAGTCGGTCA ACCCCGACGA GGTGGTGGCC ATCGGTGCGG CCATCCAGGC CGGCGTCCTC TCGGGCGAAG TGCAGGATGT GCTCCTGCTG GACGTGACGC CGCTGAACCT GGGTATCGAG ACGCTCGGCG GCGTGATGAC CGTGCTGATT CCTGCCAACA CGACGATTCC GACGCGCAAG AGCGAGATCT TCACGACCGC GTCGGACAAC CAGACCTCGG TCGAGATCCA CGTCCTGCAG GGCAACCGCG AGATGGCGGC CGACAACCGG AGCCTCGGGC GGTTCATCCT CGACGGTATC CCGCCCGCTC CGCGCGGCGT GCCGCAGATC GAAGTGACTT TCGACATCGA CGCCAACGGC ATCCTGCACG TGTCGGCGCG CGACAAGGCC ACCGGCAAGG AGCAGTCGAT CCGCATCGAA GCCTCCAGCG GGCTGACGCC GGAGGAGATC GAGCGGATGC GTGAAGAGGC GCGCCGGCAT GCGGCCGAGG ACCGGAAGCG GCGCGAACAG ATCGAGAAGC TCAACCAGGC CGACTCGCTC ATCTACATGA CCGAAAAGAA CCTGCGCGAG TACGGCGACA AGCTGCCGGC CGACAAGCGG GCGAAGATCG AGTCGGCGCT CGAGCGCCTG AAGGAGGTGC ACAAGGCGCG CAACTTCGAC GAACTCGACT CGGCGATCGC CCAGCTCAAC CAGGCCTGGA ACGAAGCCAG CCAGGACCTC TACCGGGCGC AGCAGGCGGC CGGTGCGCAG ACGTCCGACG GTGCCTCGGC GCAGGCCGAC TCCGGTGGCG TCCGCGAGGC CGACTACGAG GTGATCGACG AGGACGACAA AGACAAGCAG TAA
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Protein sequence | MGKIIGIDLG TTNSVVAVME GGEPKVIINP EGSRVTPSVV AFTADGERLV GAPAKRQAIT NPKNTIFSIK RFMGRFYDEV TEEISMVPYK VVRGENNTVR VEVEVGGEKR LYTPQEISAM ILQKLKQTAE EYLGEPVTEA VITVPAYFND AQRKATKEAG EIAGLKVRRI LNEPTAAALA YGLDKKDKEL KIAVYDLGGG TYDISILELG DGVFEVKATN GDTHLGGDNF DQRLIDYIAD EFQKQEGIDL RKDPMALQRL KEAAEKAKIE LSSAMKTTVN LPFITATAEG PKHLVMEITR AKFEQLIEDL VARTIPPMEQ ALKDAKLRKE DIDEVILVGG STRIPLVQRT VEEFFGKKAN KSVNPDEVVA IGAAIQAGVL SGEVQDVLLL DVTPLNLGIE TLGGVMTVLI PANTTIPTRK SEIFTTASDN QTSVEIHVLQ GNREMAADNR SLGRFILDGI PPAPRGVPQI EVTFDIDANG ILHVSARDKA TGKEQSIRIE ASSGLTPEEI ERMREEARRH AAEDRKRREQ IEKLNQADSL IYMTEKNLRE YGDKLPADKR AKIESALERL KEVHKARNFD ELDSAIAQLN QAWNEASQDL YRAQQAAGAQ TSDGASAQAD SGGVREADYE VIDEDDKDKQ
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