Gene Rmar_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2176 
Symbol 
ID8568839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp2531722 
End bp2532279 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID 
ProductABC-type uncharacterized transport system periplasmic component-like protein 
Protein accessionYP_003291443 
Protein GI268317724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACCC TGCGACTGTT TACGGTGCTT TCGCTGCTGT TGACCTCCGC CTTCACCCTG 
TTTCCTGAAA CGGAAACGGA AGTCACGCCC ATTCAGCAGC TCTTTCTGAT CAAGGAACTG 
AAGCCCGGTA TTGCCCGCAT CGGCGTGATC TGGGACAAAA ACGCGGCCAA TCGCGACGAG 
GTGTTGCCGC AGTTGCAGCG CGCCTCGGCG GCCACCGGCA TCAAAGTGGT CGTGGCTGAG 
GTGGCCAGCC TGCAGGAAGT GGCGCCGCAG TTCCGCACGT TGCTTCGGGA TCATCAGGTC 
GAAGCGCTCT GGGTGCTGGA AGAATCGGGC CTGCTCGGTC AGGCGGCGGC CCGTAGCTTC 
CTGATCAAAA ACGCCACGCA GGCAGGTATG CCAGTCTTTG CGCCCTCTGA GACCTGGCTG 
AAAGAAGGCG CCTGCGTTAC CTGGCGCAAA GATGCCGAAG GGATCCGGCT GGTGGTGAAC 
AAGGCGGTGG CCGAGGCGAT GGGCATCACG ATCCCGGCCA AGTACCAGGA TCGCACGGCC 
TTCCTGGCCA TGAACTGA
 
Protein sequence
MHTLRLFTVL SLLLTSAFTL FPETETEVTP IQQLFLIKEL KPGIARIGVI WDKNAANRDE 
VLPQLQRASA ATGIKVVVAE VASLQEVAPQ FRTLLRDHQV EALWVLEESG LLGQAAARSF 
LIKNATQAGM PVFAPSETWL KEGACVTWRK DAEGIRLVVN KAVAEAMGIT IPAKYQDRTA 
FLAMN