Gene Rmar_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2104 
Symbol 
ID8568765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2455787 
End bp2457535 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content65% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003291372 
Protein GI268317653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCC GACCTCTGTT TCTGTTTGCC CTCCTATTGG TGACGCTTCC CGTTAACCTC 
AACGCGCAAC AGCCTTCCGG GCAACAGGCC TCCAACCAAA ATGACATCCC GACCATCACC
CGGACCTACG CCATCACCAA CGCCCGCATC GTGGTGGCGC CGGGCCAGGA AATTCCCCGG
GGCACGGTGG TGCTCCGCAA CGGCGTGATC GAGGCGGTCG GCCCGGACGT GCCGGTGCCC
ACCGACGCCT GGGTGCTGGA AGGCGACTCG CTGGTGGTCT ACGCCGGCTT CATCGACGGC
CTCTCCCACG CAGGCGTGCC GGCACCACGC CGCGACGAAA ACCAGCAGGA AGAGCGCCGT
CGCGTACAGA ATCCGGGCGA TCCTCCCCCC GAACTGGCCG GACTGACGCC GGAGCGCGAC
GTGCGCATGT TGCTGAAGCC CGATGACGCC TCCGTGGAAA AACTGCGCCG CGTGGGCTTC
ACCATGGCCC ATGTTGTGCC CCGTGGCCGC ATGCTGCCGG GCCAGGGTGC CCTGATCTTT
CTGCGCGGCC AGACCCCGGC CGAAATGGTC TACCGGGGCG AGGTCTCGCT GTTCGCTCAG
CTTGAGCCGG CCCAGGGCGT CTATCCGGCC ACCGACATGG CCGTACTGGC CCGCTTCCGC
CAGCTCTACC GCGAAGCGGC CCGCCGCCGG CAACACACCA CGCTCTACGC CAGCGATCCG
CGCGGCCTGG AGCCACCGCC CTACGATCCG GTCCACGCCG CCTTCTTCCC GGTGCTGGAA
AAACGACAGC CGGTTTTCTT CTACACCGAA GATGCCCTGG ACATTCACCG GGTGCTGGCC
CTGCAACAGC AGCTCGACTT TCCGCTGCGG CTGGCCGGAC TTGCCCAGAG TTTCGACGTG
CTGGAAAAAC TCAAACAGGC AAATATTCCG CTATTTCTGA CGCTGGATTT GCCGGAGGCC
CCCAAAGACA CCAGCAAACT CGGCAAACTG TCGGACGATT CGCTGGCTGC TCGGTATCAT
ACGTATTTGC ACGTATCCAG CTATCGTGAT GTGCCGGCGG AAATCGAGAA TCTGAAAGCA
CGTCAGGCAA AAGAACGCAT CAAATACTAT GAAACTGCGG CGCGCCTGCA CGAAGCCGGT
CTGCGCTTTG GCTTCAGCAC GCGCGATGCC GATCCGGACA AAATTCTGGG CAACCTGCGC
ACCATGATCA AATACGGGCT GCCCGAAGAA GCGGCGCTGG CGGCGTTGAC GATCGATGCG
GCCCGCCTGC TCGGGATCGA GCGCGCTGCG GGCACGGTCG AGGTCGGCAA ACTGGCCAAC
CTGGTGGTAA CGACCGGACC GCTCTTCGAC GAAAAGACGC GCATCCGCTA CGTGTTCGTG
GCCGGCGAGC TGTTCGAAAT CAAGGAACCG GCCCGGCGTC CGCGTGCGCG AGAGGAGGGT
GCCCCCCCGG CCCGCGCCGA CGGCACCTGG TCCTGCACGG TGGACTCGCC GGAAGGCGCT
ATCGACACGA CGCTACGCAT CGAGGGGCAA TCCGGTACAC TCTCCAGCAG CGCCATTCCT
CAGGAACTCC CGCTGGAGAA CCTGACGCTG GAGGGCTCGC AGCTTTCCTT CAGTGTCATG
ACCAACGCCT ACGGACGCGT TGATGCGCGG CTGACACTGA GCGGCGATGC GGCCGAGGGC
ACCATCGACG TGCCCGGCGT CGGCGGCCTG CCCATGCGCT GCACCCGTAC TTCCGGACCT
GAACGCTAA
 
Protein sequence
MEPRPLFLFA LLLVTLPVNL NAQQPSGQQA SNQNDIPTIT RTYAITNARI VVAPGQEIPR 
GTVVLRNGVI EAVGPDVPVP TDAWVLEGDS LVVYAGFIDG LSHAGVPAPR RDENQQEERR
RVQNPGDPPP ELAGLTPERD VRMLLKPDDA SVEKLRRVGF TMAHVVPRGR MLPGQGALIF
LRGQTPAEMV YRGEVSLFAQ LEPAQGVYPA TDMAVLARFR QLYREAARRR QHTTLYASDP
RGLEPPPYDP VHAAFFPVLE KRQPVFFYTE DALDIHRVLA LQQQLDFPLR LAGLAQSFDV
LEKLKQANIP LFLTLDLPEA PKDTSKLGKL SDDSLAARYH TYLHVSSYRD VPAEIENLKA
RQAKERIKYY ETAARLHEAG LRFGFSTRDA DPDKILGNLR TMIKYGLPEE AALAALTIDA
ARLLGIERAA GTVEVGKLAN LVVTTGPLFD EKTRIRYVFV AGELFEIKEP ARRPRAREEG
APPARADGTW SCTVDSPEGA IDTTLRIEGQ SGTLSSSAIP QELPLENLTL EGSQLSFSVM
TNAYGRVDAR LTLSGDAAEG TIDVPGVGGL PMRCTRTSGP ER