Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2084 |
Symbol | |
ID | 8568743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2430012 |
End bp | 2432759 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | aconitate hydratase 1 |
Protein accession | YP_003291353 |
Protein GI | 268317634 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.962704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCAGG CTTCGGAAAA ACCCCGCGAT CTGCTCGGCA CGCGCGACAC GTTCGACACC GGACACGGCA CTGCCTACAT CTACCGGCTC GATCGGCTGG AAAAACTGGG CTTTTCGGGA CTGGATCGCC TGCCGTTCTC GATCAAGGTC CTGCTGGAAG GACTGCTGCG CACCTGCGAC GGCTATCTGG TGACGCAGGA GGACGTGGAG CGGCTGGCTC GCTACAATCC GAAGGCGCCG GCCGCCGAAG AGATCCCGTT CATGCCGGCG CGGGTGCTGT TGCAGGACTT CACGGGCGTG CCGGCCGTGG TGGACCTGGC CGCCATGCGC TCGGCCATGG CCCGCCTGGG CGGCGACCCG GAAGTGATCA ACCCGCGGGT GCCGGTGCAT CTGGTGATCG ACCACTCCGT GCAGGTCGAT TACTTCGGCA CGCCGGAAGC GCTGCGTCTC AACGCCGAAC TGGAGTTCAA GCGCAATCGG GAACGCTACG AATTTCTGCG CTGGGGCCAA AAGGCTTTTG AGAACTTTTC GGTCATCCCG CCGGCCAGTG GCATCTGTCA CCAGGTCAAC CTGGAGTACA TCTCGCGGGT GGTCTGGAGC CGGCCGGAGG ACGACGGTGT ACCGGTCGCC TATCCCGACA GCCTGGTCGG CACCGACAGC CACACGACCA TGGTCAACGG CCTGGGCGTG CTGGGCTGGG GCGTCGGCGG TATCGAGGCC GAGGCGGTCA TGCTGGGCCA GCCCATCTAC ATGCTCATGC CGGAGGTGAT CGGCTTCCGG CTCACCGGCG AGCTCCCCGA AGGCGCCACG GCCACCGACC TGGTGCTGAC CGTCACGCAG ATCCTGCGTC AGTACGGCGT CGTGGGCCGC TTCGTGGAAT TCTTCGGGCC GGGCCTGAGT AAGCTTTCGG TACCCGACCG CGCCACGATC GCCAACATGG CGCCCGAGTA CGGTGCCACA ATGGGCTTCT TCCCGGTCGA CCAGGAAACG CTCGATTACC TGCGGCGCAC CGGCCGCCCG CAGGAGCTGA TCGACCTGGT CGAGCGCTAT ACAAAAGAGC AGGGGCTGTT CCGCACGGAC GAAACGCCCG ATCCGGAATT CCTGGACGTC ATCGAGCTGG ACCTGGGCAC CGTGGTGCCC AGTGTGGCCG GCCCGAAGCG GCCGCAGGAC CGCATCGACG TGCCTGCGCT CAAGCAGGCC TTCCGGACGG CCTTCACGGC GCCGGTCGGA CCCAAAGGCT TCGGCCGCAA GCCGGAAGAA TTCGAGCAGA CGGCCACCTA CCGGGACGAG CAGGGGAACG AAGTGCAGCT CCGCCATGGT GACGTGGTGA TCGCGGCCAT CACGAGCTGC ACGAACACGA GCAACCCCTC GGTGATGCTG GGGGCCGGTC TGCTGGCGAA GAAGGCCGTC GAAAAAGGAT TGAAGGTGCC GCCTTACGTC AAGACCAGCC TGGCACCCGG CTCCAAGGTG GTGACCGACT ACCTGATCGA GTCGGGGCTG TTGCCCTACC TCGAAAAGCT GGGCTTTGAC GTGGTCGGCT ACGGCTGCAC GACCTGCATC GGCAACTCGG GGCCGCTTCC CGAGCCGGTG GCCCGGGCGA TCAAAGAAGG TAATCTGGTG GTGGCCGGCG TGCTTTCGGG CAACCGGAAC TTTGAAGGGC GCATTCACCC GCTCGTGCAG GCGAACTTCC TGGCCTCGCC GCCGCTGGTG ATCGCCTATG CGCTGGCTGG CACCGTGAAC ATCGACTTGA TGAACGAGCC GCTGGGCAAA GATGCCGACG GCAACGATGT GTACCTGAAA GACATCTGGC CCAGCAGCCG GGAGATCCTG GATCTGATCA ACGAGGCCAT CAAGCCCGAG ATGTTCCGGA AGGAATACGA GGGCATCGAA ACCTCGAACG AGATGTGGAA TCAGATCCGG GTCTCAGGCG GCGCGCTCTA CGAGTGGGAT CCGAACTCGA CCTACATCCA GGAGCCGCCG TTCTTCGAGA ACCTGACGCC CGACGTGCCG GAAATCCAGC CGATTCTGGG GGCGCGTGTG CTGGTGCGGG CCGGCGATTC GACCACGACC GACCACATCT CGCCGGCCGG TTCCATTCCG CCCGACAGCC CGGCCGGCCG CTATCTGATC GAACGAGGCG TCAAGCCCAT CGACTTCAAC TCGTACGGTT CGCGGCGCGG CAACCACGAG GTGATGATGC GCGGCACGTT CGCGAACATC CGCTTCAAGA ACCTGCTCGT GCCGGGCACC GAGGGCGGCA TCACGCGCTA CTTCCCGACC GGCGAGATCA TGCCGATCTA CGATGCCGCC ATGCGCTACA AGGAGCAGGG TATCCCGCTG ATCGTCATCG GCGGCAAGGA TTACGGCATG GGCTCCAGCC GCGACTGGGC CGCCAAGGGA ACGGCGCTGC TCGGTGTGCG GGCCGTACTG GCCGAGAGCT TCGAGCGCAT CCACCGCTCG AACCTGATCG GCATGGGTGT GCTTCCGCTC CAGTTCAGGG AAGGCGAAAA CGCCGAGTCG CTGGGGCTGG ACGGCTCGGA AGTCTACGAC ATTCCGGTGA CCAATGACGT CAAACCGCGC CAGACGCTGA CCGTCACGGC CACGAAGGCC GACGGCTCGA AGGTGACCTT CGAGGTACTG GTGCGGCTCG ACACGCCCGT TGAGGTGGAA TACTACCGGC ACGGTGGTAT CCTCCACTAC GTGCTCCGCG ACTTCCTGCG CAGCCAGCCC GAGCGCGTCG AGGCGTAG
|
Protein sequence | MSQASEKPRD LLGTRDTFDT GHGTAYIYRL DRLEKLGFSG LDRLPFSIKV LLEGLLRTCD GYLVTQEDVE RLARYNPKAP AAEEIPFMPA RVLLQDFTGV PAVVDLAAMR SAMARLGGDP EVINPRVPVH LVIDHSVQVD YFGTPEALRL NAELEFKRNR ERYEFLRWGQ KAFENFSVIP PASGICHQVN LEYISRVVWS RPEDDGVPVA YPDSLVGTDS HTTMVNGLGV LGWGVGGIEA EAVMLGQPIY MLMPEVIGFR LTGELPEGAT ATDLVLTVTQ ILRQYGVVGR FVEFFGPGLS KLSVPDRATI ANMAPEYGAT MGFFPVDQET LDYLRRTGRP QELIDLVERY TKEQGLFRTD ETPDPEFLDV IELDLGTVVP SVAGPKRPQD RIDVPALKQA FRTAFTAPVG PKGFGRKPEE FEQTATYRDE QGNEVQLRHG DVVIAAITSC TNTSNPSVML GAGLLAKKAV EKGLKVPPYV KTSLAPGSKV VTDYLIESGL LPYLEKLGFD VVGYGCTTCI GNSGPLPEPV ARAIKEGNLV VAGVLSGNRN FEGRIHPLVQ ANFLASPPLV IAYALAGTVN IDLMNEPLGK DADGNDVYLK DIWPSSREIL DLINEAIKPE MFRKEYEGIE TSNEMWNQIR VSGGALYEWD PNSTYIQEPP FFENLTPDVP EIQPILGARV LVRAGDSTTT DHISPAGSIP PDSPAGRYLI ERGVKPIDFN SYGSRRGNHE VMMRGTFANI RFKNLLVPGT EGGITRYFPT GEIMPIYDAA MRYKEQGIPL IVIGGKDYGM GSSRDWAAKG TALLGVRAVL AESFERIHRS NLIGMGVLPL QFREGENAES LGLDGSEVYD IPVTNDVKPR QTLTVTATKA DGSKVTFEVL VRLDTPVEVE YYRHGGILHY VLRDFLRSQP ERVEA
|
| |