Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1982 |
Symbol | |
ID | 8568639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2311956 |
End bp | 2313425 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | glycogen/starch synthase, ADP-glucose type |
Protein accession | YP_003291253 |
Protein GI | 268317534 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACGTAC TGCATGTAGC GTTCGAGTGC GCACCGATTG CCAAGGTAGG CGGTCTGGGC GACGTGCTGG GGGCGTTGCC CAAGTTTCTG CGCCGGGCCG GCATTGAAGC AGCGGTGCTC ATGCCCCGCT TTGGCGATGC GCAGCTGCAG GAAGACGCGC TGCGCCTGAT TCACGAAGGG GCGTTCACCT ATCGGGACCG CACCCTGTCC TACCGGCTCT GGCAGCAGGA TGCCGAGGTG CTCGGATTTC CCGTGTATCT GCTGGAGGAG CCGGTCCACT TCGGGCGCCC CGGCGTGTAC CAGGATCCGA CCACCGGGCT GGATTTTCCC GATCAGGCCG ATCGCTTTTT CGTGTTTCAG CGGGGCGTGC TGGCGGTTTT GAAGGAGGGC GTGCTCCGTC CCGATCTACT CCATCTGCAC GATCATCATA CGGCGCTGCT GCCGGTCTGG CTGCGCGAAG ATCCGGCCTA TCGCGAGCTG GCCGAGCTTC CGATCGTGTT CACCGTGCAC AATGCCGAGC ATCAGGGGCG TTACGACTGG CAGGTGTGGG AGGAGATTGG CGTGCCGGTG GCGCGGCCCG AGGACCTGCA GCACCGGGGC CAGCTCAACG CCATGAAGGC CGGACTGCTC TGGGCCGATG CCGTGACCAC GGTGAGTCCG GGTTACGCGC GCGAACTGCA GGAGCGTGAA GATATCGCCG CCGGGCTGCA GGAAGTCTTT CAGCGCGTGG CGCACAAAAT GCGGGGCATT CTCAACGGCA TCGATCCCGA CGTCTGGAAT CCGGCCACCG ATCCGCTCAT TTTTGCGAAC TACTCGGTGG AGGATCTTTC CGGTAAGGAA AAGAACAAAA AAGCGCTGTG CGAATCGCTG GGACTCCGGC CCGATCGGCC CCTGCTGGTG TTCATCGGTC GGCTGATGCA GGAGAAGGGG GTCGATCTGC TGGTGGCCGG ACTGGAGCAG CTGCTGACGC ACCAGATCGA CGTGTCGGTG GTGGTGCTGG GTACGGGCAT GCCCGCCTAT CAGGCGGCGC TGGAAGACCT GCGCTGTCGG ATCGTGCGGC CCGGAGGCTT TCCCCGACTG GTGTTGCGGT TCGAGTTCAA CAACACGCTG GCGCACCAGC TCTACGCGGC AGGCGACATG CTGCTGATGC CCTCGCGGGT GGAGCCCTGC GGGCTCAATC AGATGTACGC CATGACGTAC GGCACCGTCC CGATCGTGCA TGCCGTGGGC GGCCTGCGGG ATACGGTCGA GCCCTGGGAT CCCCGTACGC AGCAGGGCAC GGGCTTTCGC TTCGAGACGT TCACGCCCCG CGCCTTCCAT CAGGCCATCC GGCGGGCGCT TACCGTCTAT CACCGACCCG ATCAGTGGCG TGTGCTGCAG CGCAACGGCA TGCAGCGCGA CTGGTCCTGG GATCGCTCGG CGCAGGAATA TCTGGAACTG TACCGGACGC TGGTGCCGGT AACCTCGTAA
|
Protein sequence | MYVLHVAFEC APIAKVGGLG DVLGALPKFL RRAGIEAAVL MPRFGDAQLQ EDALRLIHEG AFTYRDRTLS YRLWQQDAEV LGFPVYLLEE PVHFGRPGVY QDPTTGLDFP DQADRFFVFQ RGVLAVLKEG VLRPDLLHLH DHHTALLPVW LREDPAYREL AELPIVFTVH NAEHQGRYDW QVWEEIGVPV ARPEDLQHRG QLNAMKAGLL WADAVTTVSP GYARELQERE DIAAGLQEVF QRVAHKMRGI LNGIDPDVWN PATDPLIFAN YSVEDLSGKE KNKKALCESL GLRPDRPLLV FIGRLMQEKG VDLLVAGLEQ LLTHQIDVSV VVLGTGMPAY QAALEDLRCR IVRPGGFPRL VLRFEFNNTL AHQLYAAGDM LLMPSRVEPC GLNQMYAMTY GTVPIVHAVG GLRDTVEPWD PRTQQGTGFR FETFTPRAFH QAIRRALTVY HRPDQWRVLQ RNGMQRDWSW DRSAQEYLEL YRTLVPVTS
|
| |