Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1962 |
Symbol | |
ID | 8568619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2288179 |
End bp | 2289393 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_003291233 |
Protein GI | 268317514 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCCG TGCAGGAAAC TTCCGAGACG GCATCGTCGC CGGTTGCTGC GCCCCGTCGG CTGGCCGTGC TGGGCGCGAC GGGTTCGATC GGCACGCAGA CGCTCGACAT CGTGCGGCTT TTCCCGGATC GGCTCTCGGT GCAGGTCCTG ACGGCCCGTC GCAACGCGGC GCGTCTGCTT CAGCAGGCCC TGGAATTTCG TCCGGCCTGT GTGGTGATCG ACGATCCGGA GGGCTACCGG CAGCTTCGCG AGGCGCTGGC CGGCACAGGG ATCGAGGTAT TGCAGGGGGA GGAAGGGCTC TGCGCCTGCG TGCAGCGGCC GGACGTGGAC GTGGTGGTGG CGGCACTCGT CGGCTTTGCC GGACTGCGTC CGGTGCTGGC GGCCCTGGAA GCCGGCAAGC AGGTGGCGCT GGCCAACAAG GAGACGCTGG TGGCCGGCGG GGCGCTGGTG CATGAAGCCC TGCGCCGGCA CGGGGGTACG TTGATCCCGG TCGACAGTGA GCATTCGGCC ATCTTTCAAT GTCTGGTTGG AGAGAATCCG GCTTCGGTCG AAACGCTGAT CCTGACGGCT TCGGGCGGGC CGTTCCGGAC GCGACCGCTG GAGACGTTCG ACCACATCAC ACCGGACGAG GCGCTCTGCC ACCCGAACTG GTCGATGGGC GCCAAGGTGA CGGTCGATTC GGCCACCATG ATGAACAAAG GGCTGGAGGT CATCGAGGCG CACTGGCTCT TCGAGCTACC GGCCGAGCGC ATCCAGGTGC TCGTGCATCC TCAGTCGATC ATTCATTCGA TGGTCACCTT TGTCGACGGC TCGACGAAAG CGCAGCTCGG CGTGCCCGAC ATGCGGCTGC CCATCCAGTA CGCGCTGAGC TATCCCGAAC GCTGGGAGGC CCCGCACGAG CGCATCGACT GGGTGCAGCT GGGCCGGCTC GACTTCGAGG CGCCCGATCC AGCGCGGTTT CCCTGCCTGC CGCTGGCCTA CGAAGCACTG CGTCGGGGTG GCACGGCGCC GGCCGTGCTC AACGCCGCCA ACGAGCAGGC CGTCCAGCTC TTTCTGCAGG AACAGATTCG CTTTACCGAC ATAGCGCGAC TGGTTGAGGC GGCCCTTGAA CACCTGAGCG AGCCCGACGA GGTGCCCTCC TACGAACACC TGCAGGAAGC CGACCGCAGG GCGCGGCGGT ACGTGCAGGA ACTCGCCGGT GTGGCCGCCC ATTGA
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Protein sequence | MQPVQETSET ASSPVAAPRR LAVLGATGSI GTQTLDIVRL FPDRLSVQVL TARRNAARLL QQALEFRPAC VVIDDPEGYR QLREALAGTG IEVLQGEEGL CACVQRPDVD VVVAALVGFA GLRPVLAALE AGKQVALANK ETLVAGGALV HEALRRHGGT LIPVDSEHSA IFQCLVGENP ASVETLILTA SGGPFRTRPL ETFDHITPDE ALCHPNWSMG AKVTVDSATM MNKGLEVIEA HWLFELPAER IQVLVHPQSI IHSMVTFVDG STKAQLGVPD MRLPIQYALS YPERWEAPHE RIDWVQLGRL DFEAPDPARF PCLPLAYEAL RRGGTAPAVL NAANEQAVQL FLQEQIRFTD IARLVEAALE HLSEPDEVPS YEHLQEADRR ARRYVQELAG VAAH
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