Gene Rmar_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1960 
Symbol 
ID8568617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2285872 
End bp2286693 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_003291231 
Protein GI268317512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.592737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCAGCA CCACGAACAC GGCCGACCCG GTGACCATCA CGGGCAAGGT GCAGACCGAA 
GAAGACCGGG CGCTGCAGGA GGAGCTCCGG CAGCGGGGAC CCTTGCCCGT CCATATCGCC
ATCATCATGG ACGGGAACGG CCGCTGGGCC CAGCAGCAGG GCAAGCGGCG CGTGGTCGGC
CACTACGAAG GCGTCGAGTC GGTGCGCGAC ATCACGGAAG CCTGTGTGCA GCTCGGCATT
CCGTACCTGA CGCTCTACAC CTTCAGCACG GAGAACTGGC AGCGGCCGGC CTCCGAGGTC
AACGCACTCA TGCAACTCCT GGTGAAGACG ATTCGCCGGG AGAAGACCCG GCTGCTGGAA
AACGGCGTGC AGCTACGTGT GTTGGGCGAG ATGGCGCAGC TTCCGCCGGT GTGCCAGGCC
GAACTGGAAC AGGCCGTGCA GGAGACGGCC CGAAACGACC GACTGGTGCT GACGTTGGCG
CTTTCCTACA GCGGCCGCTG GGAAATCCTG CAGGCCGTGC GCACCCTGGC CCGCCGCGTG
CAGGAAGGTG CGCTTCGCCC CGAGGACATC GACGAGGCGA CGTTCGCCGC CGCACTGCCC
GGTGCTGGAC TGCCCGATCC CGACCTGCTG ATCCGGACGG GTGGCGAATT TCGCGTATCC
AACTTCCTGC TCTGGCAGAT CGCCTACACC GAACTTTACA TCACAGACGT TTACTGGCCC
GCCTTCCGGC GGCGCCAGCT CTACGAGGCC ATCCGCAGCT ACCAGAACCG TGAGCGACGG
TTTGGCCGCA TCTATACCTC GGATACGAAT GGTACCGAAT AA
 
Protein sequence
MGSTTNTADP VTITGKVQTE EDRALQEELR QRGPLPVHIA IIMDGNGRWA QQQGKRRVVG 
HYEGVESVRD ITEACVQLGI PYLTLYTFST ENWQRPASEV NALMQLLVKT IRREKTRLLE
NGVQLRVLGE MAQLPPVCQA ELEQAVQETA RNDRLVLTLA LSYSGRWEIL QAVRTLARRV
QEGALRPEDI DEATFAAALP GAGLPDPDLL IRTGGEFRVS NFLLWQIAYT ELYITDVYWP
AFRRRQLYEA IRSYQNRERR FGRIYTSDTN GTE