Gene Rmar_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1946 
Symbol 
ID8568603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2273015 
End bp2275249 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003291217 
Protein GI268317498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGGGC AGATTAAAAA TATCGAGCTG GCGCGGCCGT CCTATCGCTA CCTGGCCTTT 
GTGGAGGTCG AGACCGACGA CGGCAATCGC TGGCGGCTGC CCATGACGGG CACGGTGGCG
CAGTGGTTGC GCGTGGGCCA GCGCGTGCAG CTCGCCGCCG AAAAGCCGCA GCCCGGCTTC
GACGACTATT CACTTCGGAC GGCCCGCGTG GCCGTCTGGC CGCTGTTCGA GCGCATCTAC
ACGCTGGAGC GTCGTTCGCT TTTTTCCGAC CGGGTGCTTT ACCGCTACCG GCTACGTGCC
CGCGAGGCCC GCTACGAGCG CGACTACGCG GCCATCGTCG AACTGGAACA GTACCACTAC
GCCTCGCGCG AGCGCGTGCT GGCCCTCTGG TATTGTGAGC GGTGCGGCAC CTATCGGGCC
GCCAACGCCC GGCCGGACTG CCCGGCCGGA CACGGCCCCA TGCGTTTCCA CGACCTGAAA
GACGCCACCC GTGCCTCGCG CTTTCTGGTG CTGGAACTGC TCGACCGCCA GCCCTACGAA
CCCGAGGTGG TGGGCTACGT GCGCGTCGAT CCGCCGCTGC CGCTGCTGCA CCGCCGCCGT
CCCGACGGGA CGCTCGACCG CGACATCCGC CGCCGTATCT TTCCGCCGGA ATGGTTCGAC
CATCCGTTCC ATCCTAATCA GGACGTGCCG CCCGAAGCCT GGTGGGACGA GCAGGGGAAG
GTGCTGGCCC GCGCCCGCTC GCCCGTGGCC CGACTGGCGC GCGTGGTGGT GCATCCGGAC
TACCGCGCCG ACGGACTGGG CGTGCAGGCG CTGCACTGCA TGATGGACTG GGTGCGCGAG
CGCTGGATAC CCGACATGCG CCTGCCCAAA CGGGCTGTCG AGACCGTGGC GCAGATGGCC
CGTTTCCATC CGTTCATGGA GAAGGCCGGG TTCGTCTTTC TGTTCGAGAC GGGCTCGGGC
CGTCCGGCGC TCTACCTGCC GCTGGACGAG ACGGCCCGCG AGGCCATCGA GCGCTTTCTG
CAGGAAGACG AGCTGGCCCG GGCGCATGGC GGACGGCTCT ATCGCCCGCG CTTTACGCCG
GTCGAGCCGC TGAGCGGACC GGTGGTGCTG CACCGGGTGA CCAAAACGTA TCACAACCGG
CTAAATCTGG AAGGACTTTC CGAACCGGTG CGTGAGGCGC TGGAAGCTTT CGGCGTGGAA
GAGCGCGAGA TTCAGACCTA TGTCTTCCGA GATGCCGACT TCCGGCTGGA GCCGGGCACG
GTCAACGCCA TTGTGGGCGC TTCGGGAAGC GGCAAGACCA CACTGCTCCG AATGCTGATC
GGGGCGGCCA CCGGGCGGGA CGACCCGCTC TACCGGGCCG ATGAAGGGGA GATCCGGATG
CCCGACAACG TGCGGCTGCA GGCGCTGATT CCCGGTGAGG CCGAGCCAGA GCTGGGCACG
CAGCCCGTGT TGGAGTCGCT CTATCGGATT ACGGGCGATG CCGCACTGGC CATCGAGATC
CTGAACGCGG CCGGCCTGGC CGACGCCGTG CTGTTCCGGG CGCCCTACGC GGAGCTGTCC
ACCGGACAGA AAGCCCGCGT GCAACTGGCC TGGGCGCTGG CGCATCGGCC CAATCTGCTG
CTCATCGACG AATTTGCGGC GCATCTCGAC CCGCGCATGG CCGCCCGGGT GGGACGCAAG
CTGGCCGAAC TGGCCCGCAC GCACGGCATC ACGCTGGTGC TGGTGACGCA CCGGCCTGAA
CTGCTTCGCG TGCTGGAGCC CGACACCATC TACATGGTCG GCTATGGCAC GCTCTTTCGG
GCCGACGAAC TGCCCGAACT GGGCCTGTTC ATCCGCGAGC CGTACGCCAG CTTCGTCGTG
GAGGGTAAGA AAACCTGGGA AATCCGGAAG CACCCCACGC GTGTGCGCGG GCGCATCGGG
ATTATCAGCG GAGGCAAGGT GATCGGCACG GCCGAAATCC GGGAAACACG GGGACCGTTT
TCCGTGGAGG AGCTCGGCGC CCATGCCGAC AAGCATCTGG CCGACGCCGA AACGCTCGAA
GCCTACGCGC AGGGGCGTCC GCTCTACGCC TGGGTGATGG AGCGCGCCCG CCGTCTGGAT
CGACCCGTGC CGATCCGTCG GCGTCCCGGT CACCAGCTCT GGGTGCGGTT GCGCGCCGAA
GATCAGCAGG GCGCGTCCGA TCAGGACGAA AGCGCCGGAG CTTCGACCGA CACCTCCTTG
GGCAAACAGA GGTAG
 
Protein sequence
MRGQIKNIEL ARPSYRYLAF VEVETDDGNR WRLPMTGTVA QWLRVGQRVQ LAAEKPQPGF 
DDYSLRTARV AVWPLFERIY TLERRSLFSD RVLYRYRLRA REARYERDYA AIVELEQYHY
ASRERVLALW YCERCGTYRA ANARPDCPAG HGPMRFHDLK DATRASRFLV LELLDRQPYE
PEVVGYVRVD PPLPLLHRRR PDGTLDRDIR RRIFPPEWFD HPFHPNQDVP PEAWWDEQGK
VLARARSPVA RLARVVVHPD YRADGLGVQA LHCMMDWVRE RWIPDMRLPK RAVETVAQMA
RFHPFMEKAG FVFLFETGSG RPALYLPLDE TAREAIERFL QEDELARAHG GRLYRPRFTP
VEPLSGPVVL HRVTKTYHNR LNLEGLSEPV REALEAFGVE EREIQTYVFR DADFRLEPGT
VNAIVGASGS GKTTLLRMLI GAATGRDDPL YRADEGEIRM PDNVRLQALI PGEAEPELGT
QPVLESLYRI TGDAALAIEI LNAAGLADAV LFRAPYAELS TGQKARVQLA WALAHRPNLL
LIDEFAAHLD PRMAARVGRK LAELARTHGI TLVLVTHRPE LLRVLEPDTI YMVGYGTLFR
ADELPELGLF IREPYASFVV EGKKTWEIRK HPTRVRGRIG IISGGKVIGT AEIRETRGPF
SVEELGAHAD KHLADAETLE AYAQGRPLYA WVMERARRLD RPVPIRRRPG HQLWVRLRAE
DQQGASDQDE SAGASTDTSL GKQR