Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1941 |
Symbol | |
ID | 8568597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2266979 |
End bp | 2269690 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | glycoside hydrolase family 2 sugar binding protein |
Protein accession | YP_003291212 |
Protein GI | 268317493 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.615536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCT CCGGTTCTCG CTATCGGATG TTTTTAGGAG GCGGGCTGCT CCTGCTGCTG ACGATCCTGC CATTGCAGGC ACAACCCGCG CAGGAGCTGC TGCGCGAGCG GGTTTTGCTT AATGAAGACT GGCGCTTCTT CAAGTACCCC TCCCGGGCGG AAGCCGACGG ACTGGTCTAC GACGTGTGGC CGATGTACCG GATGGATGCA GACACCGCCG GAGCACCGAA GGAGGCGATC GTCCTTAAGC CCTGGATTCT GCCCACGGGC AATCCTTTCA TCAAAGATCC GGCCCGACGT TACAGGCGAC CCCCGGGACA TCCCGGGCGT GACTTCCCGT TCGTGCAGCC GGACTTCGAC GATAGCGGCT GGGAACGAGT AGACCTGCCG CACGACTGGG CCATTCGGGG CCCCTTCGTG GAACAACCAC ATCCCGAGGT GGACGGCGGC ATGGGCTGGC TGCCCAGCCC GGGCGTGGCC TGGTACCGGA AGAAAATCTT CATCCCGGCC GCCGATTCGG AGCGGGCGAT CTACCTGGAC GTCGAGGGCG CGATGGCTCA CGCCGTCGTC TGGCTGAACG GCTACCTGGT GGGTGGCTGG CCCTACGGCT ACGCTTCCTG GCGCGTGGAT CTGACCCCAT ACGTCCGCTG GGGCGCGGAA AACCAGCTTG CCATCCGACT TGAGGTGCTT CCACGCTCGT CGCGCTGGTA TCCCGGCGGT GGATTGTACC GCAACGTCTG GCTGGTCAAG ACGCATCCGG TGCACGTGGC GCAATGGGGC ACGTTCGTGC GCACACCCTA CGTCTCGACC GACTCGGCCA CCGTTGTGCT GGATGTGACC ATCGAAAACC GATGGGCCCG GGCCGTCTCG GTGCGCGTTA CGACAGAGAT CTTCGAGCTG GGCGAAGAGG ACCGGCCACG GGGCGATGCC GTCGCCGCGT TCCCGCCCCG GCAGGTGCGG GTACCGGCGC AGGGGCAGGC TACGGCGTCC GGCATGGCGA CGGTTCGCAA CCCGAAGCTG TGGGGACCTC CGCCCACGCA GACGCCTCAC CGCTACGTGG CCGTCACCAC GCTGTGGCTC GACGGCCGCC CGGTCGATCG CTACGAAACC CGCTTCGGCA TCCGCTCGCT GCGGTTCGAT CCGGAGCGCG GGCTGCTGGT CAACGGCGAG CGCATCGAAA TCAAAGGCGT TAACCAGCAT CACGACCTGG GGCCGCTGGG CGCGGCCTTC AACCGAAGGG CGGCCGAGCG CCAGCTCGAA CTGCTGCGTG AGATGGGCGC CAACGCCATT CGTACCGCCC ATAACCCGCC AGCTCCCGAG CTGCTGGAGC TTACCGACCG CATGGGCTTC CTCGTGCTCG ACGAGATCTT CGACGTCTGG GAGATGCGAA AAACCCCGCT CGACTTCCAC CTGATCTTTC CGGACTGGCA CGAGCAGGAC CTGCGCGCCT TTATCCGCCG CGACCGCAAC CACCCGTCGG TCATTCTCTG GAGCTTCGGC AATGAAGTGG GCGAGCAGGG AAGCGGCCGC GAGGGGGCCG AGCTGGCCCG GCGACTGGCC CGCATCATCA AAGAGGAGGA TCCCACGCGG CCGGTGACGG CGTCTATGAA TTTCGCCCGG CCGGGGACGC CGATGCCCGA GGTGGTGGAC GTCATCTGCC TGAACTATCA GGGTGAAGGG ATCCGGGACA TGCCGGCCTA TACTGGTTTG CAGGGGATCA CCACACCACC CCTTTACAGC GCATTTCGCA TACATTTCCC TACAAAAATG ATTATCAGTT GTGAAAATGC GGCCGCTGTA AGTTCGCGGG GCGCCTATCT CTTTCCAGTT ACAGATGCCC TGAGTGCACC TGTTCGTGAA GGCCAGGGGG GTGATCCGGT TACCAGGCAG GTAAGCGGCT ATGAGCTATA TACGGCGGAT TTTGGCTCTT CGGTGGACAA GGTGTTTTTC GTGCAGGAAC TCCATCCTTT TGTGGCCGGC GGTTTCGTCT GGAGCGGCTG GGACTATCTG GGCGAGCCCA CGCCCTACTA CAGTTCGCGC AGCTCTTATT TCGGGATCAT CGATCTGGCC GGTTTCAAAA AGGATCGGTT TTACCTGTAT CAGGCCCGCT GGCGTCCCGA GCTACCGATG GTGCATATCC TGCCCCACTG GAACTGGCCG GATCGCGTGG GGGAGATCAC GCCCGTGCAT GTGTTCACCT CGGGCGACGA GGTGGAACTG TTCCTCAATG GCCGATCGCT CGGCCGCAAG AAAAAAGGGC CCTACCAGTA CCGCCTGCGC TGGGACGACG TGCGCTACGA GCCCGGCGAA CTACGCGCCG TGGCCTATAA AAACGGCCGG AAGTGGGCCG AAGCCGTCGT GCAGACCACC GGCCAGCCGA CCGCGCTGGC CGCCGAGGCG GACCGTGTCC GGATCCAGGC CGACGGCTAC GACCTGGCAT TCATCACGGT GCGGGTGGTC GATGCAGAAG GGCGAACCGT GCCCACGGCG GACAATCCGG TGCGTTTCAC CGTCGAAGGA CCCGGCGAGC TGGTGGCCAC GGCCAACGGC GACCCGACCA GCTTCATTCC GTTTTCTTCG GATGAGCGGC CGGCCTTCAA CGGGCTGGTG CTGGCCATCG TGCGCGCCCG GCGTGGCATG CCCGGCACTA TTACCGTCAC GGCCAGCGCC CCCGGTCTGC GTCCGGCTCG TATCGTGATA GAAAGCCAGT GA
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Protein sequence | MRISGSRYRM FLGGGLLLLL TILPLQAQPA QELLRERVLL NEDWRFFKYP SRAEADGLVY DVWPMYRMDA DTAGAPKEAI VLKPWILPTG NPFIKDPARR YRRPPGHPGR DFPFVQPDFD DSGWERVDLP HDWAIRGPFV EQPHPEVDGG MGWLPSPGVA WYRKKIFIPA ADSERAIYLD VEGAMAHAVV WLNGYLVGGW PYGYASWRVD LTPYVRWGAE NQLAIRLEVL PRSSRWYPGG GLYRNVWLVK THPVHVAQWG TFVRTPYVST DSATVVLDVT IENRWARAVS VRVTTEIFEL GEEDRPRGDA VAAFPPRQVR VPAQGQATAS GMATVRNPKL WGPPPTQTPH RYVAVTTLWL DGRPVDRYET RFGIRSLRFD PERGLLVNGE RIEIKGVNQH HDLGPLGAAF NRRAAERQLE LLREMGANAI RTAHNPPAPE LLELTDRMGF LVLDEIFDVW EMRKTPLDFH LIFPDWHEQD LRAFIRRDRN HPSVILWSFG NEVGEQGSGR EGAELARRLA RIIKEEDPTR PVTASMNFAR PGTPMPEVVD VICLNYQGEG IRDMPAYTGL QGITTPPLYS AFRIHFPTKM IISCENAAAV SSRGAYLFPV TDALSAPVRE GQGGDPVTRQ VSGYELYTAD FGSSVDKVFF VQELHPFVAG GFVWSGWDYL GEPTPYYSSR SSYFGIIDLA GFKKDRFYLY QARWRPELPM VHILPHWNWP DRVGEITPVH VFTSGDEVEL FLNGRSLGRK KKGPYQYRLR WDDVRYEPGE LRAVAYKNGR KWAEAVVQTT GQPTALAAEA DRVRIQADGY DLAFITVRVV DAEGRTVPTA DNPVRFTVEG PGELVATANG DPTSFIPFSS DERPAFNGLV LAIVRARRGM PGTITVTASA PGLRPARIVI ESQ
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