Gene Rmar_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1925 
Symbol 
ID8568579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2248762 
End bp2249481 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID 
Productprotein of unknown function DUF558 
Protein accessionYP_003291196 
Protein GI268317477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0289082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCA CCTTCTACGC GCCTCCGGAG GCCTTCCGCG ACGGGTGGGT CCGGTTGCCC 
GACGACGAGG CCCACCACGC CGTGCGCGTG CTGCGCCACC GGCCGGGCGA CGAAGTGATC
GTCGTGGACG GCGTGGGCGG CTGGCACCGC CTGCGCCTGG AGCTGGTGGA TCGCCAGGGC
GTGCAGGGCC GCGTGCTGGA AACGCGCCGC GACGTCGGCG AACCGCCCTA TCGCCTGACC
ATCGGGCTGG CGCTGCTCAA GCAGACCGCC CGCTTCGAAA CCTTCCTGGA AAAAGCCGTC
GAACTGGGTG TTGCGGCCAT CGTGCCGCTG CTCACGGCCC GCACCGAGCG CACGCATTTT
CGTCCGGAAC GCGCCCGTCG CTTGCTCATC GCCGCCATGA AGCAGTGCGG CCGCAGCCGC
CTTCCGCTGC TGCATGCGCC CCGGCCATTT GCGGAGGTGC TGCACGATCC GGCCGCGCTC
CGCCTACTCT GCCACGAGCA GCCCGACCGC CCGCGCCACC CCATACACGA ACTGCTTCGC
CGACCGGTCG GCGACGCGCT CGTGCTCGTC GGCCCCGAGG GTGGCTTCAC CAGCGACGAA
GTCCTTCAGG CCGAAGCGGC CGGCTTCCAG ACGGTGTCGC TGGGCGCGCG TCGCCTTCGC
GCCGAAACCG CCGCGCTGGT GGCCGCCAGC GCGTTTCTGA TCTGTCAGGA CCACCGATAA
 
Protein sequence
MTTTFYAPPE AFRDGWVRLP DDEAHHAVRV LRHRPGDEVI VVDGVGGWHR LRLELVDRQG 
VQGRVLETRR DVGEPPYRLT IGLALLKQTA RFETFLEKAV ELGVAAIVPL LTARTERTHF
RPERARRLLI AAMKQCGRSR LPLLHAPRPF AEVLHDPAAL RLLCHEQPDR PRHPIHELLR
RPVGDALVLV GPEGGFTSDE VLQAEAAGFQ TVSLGARRLR AETAALVAAS AFLICQDHR