| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1857 |
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| Symbol | |
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| ID | 8568511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 2168765 |
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| End bp | 2170540 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_003291128 |
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| Protein GI | 268317409 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCGC TGGGATGGCA GGCCTGGATT ACGCTGGCGG CCATCGCCGC GATGGTCGTG
GCGCTGGTGC GGGAAGTGGC GCGTCCGGAC CTGATCTTTC TGGGGACGCT GGGGTTGCTG
CTGCTCACCG GCGTGCTCAC GCCACAGGAA GCATTCGCGG GCTTTTCGAA TCCGGCCGTG
CTGACGGTGG CGGCGCTGTT CGTGGTGGCG GCCGGTCTGC AACGCACCGA AGCGCTGGCC
TTCGTGGATC GCATCCTGTT TCCTCGCAGG CCGTCCACGG GCCGGGCCGT TCTGCGCCTG
ATGGCACCCG TTTCGGCGCT TTCGGCCTTT CTGAACAACA CGCCCATCGT GGCGATGCTC
ATGCCGCGCG TGCAGCAGTG GGCCGAGCGG CACAATCTGG CCCCGTCCAA ACTGCTCATT
CCGCTTTCGT ATGCGGCCAT CGTGGGCGGC ATGATCACGC TGATCGGGAC CTCCACGAAC
CTGGTCATCT CCGGGCTGAT GATCCAGGCC GGGTTGCCGG GCCTGCGCAT GTTCGACCTG
ACCTGGGTGG GCTTGCCCGT GGCCGTGGCC GTGATTTTGT TCTTTGCGCT GATCGGACAC
CGGCTGCTGC CGGACCGGCG GCGCGACCGG GGCGGCTTCG AGGAAGGGCT GAAAGAATGC
CTGTTCGAAC TGCGGGTCAC ACCGGGCGGC CATCTGGAGG GCAAGACGGT GGAGGAAGCC
GGCCTGCGTG CGCTGGGCGA GGCCTACCTG GTGCACATCC GGCGTAGCGG GCGCGTGATC
CCGGCCGCGC CGGAGCAGGT GCTGCAGGGC GGCGACATGC TGACGTTCGT GGGATCGGCC
CGTATGATCG AGCGGCTGCT GGAACGCGAC GGGTTGGAGC GGGCACTGCC CTCGGTGGAG
GAAAACGCCA CGCAGACGCT CCCGCTTTTC GAAGCCGTTG TGGCGCCTTC GTCGAACCTG
GTGGGAAAGA CGCTCCGCGA GGTGCAGTTC CGGGAGCAAT ATGGCGGCGT CGTGCTGGGC
ATCCAGCGGC AAGGTCAGCG TATCGTGGGG TCGCTGGGAC GCATCCCGAT CGAAGCGGGC
GATCTGCTGC TGATCGAAGC CCGGAACGGA TTCGACCGGC GCTGGAATGC CCGACGCGAC
GAGTTCTATC TGGTGGCGCC CCGAAGCCCC GAGCGTCCCC GGCCGCGTCC GCGCCATGCG
CCCATCGCGC TGGCCATCTT TGCCGGCATG GTGCTGCTGG CCGGATTGGG TTGGGTCCCG
CTGGTGACGG CGGCTTTTGC CGCGGCGCTC GGTATGGTGG CGACGCGCTG CCTGTCGGGC
AGCGAAGCCC GGCAGGCGCT CGACCTGCAG GTGCTCGTGG TGATCGCGGC GGCGCTGGGC
ATCGGCCAGG CCGTCGACCG CTCCGGACTG GCCGCCGCCC TCGGCCACGG TCTGGTGACG
CTGACGGCCG ACCTGGGACC CGTGGCCGCG CTGGCCGTGC TGTACCTGGT CACCATGGTG
CTGACCGAGT TGTTCACGAA CAACGCGGCC GCCGCGCTCA TGCTGCCCGT GGCGTTGGCC
GTGGCCGGCG AACTCGGGCT TGAACCCCGG GCCTTCGCCA TTACGATCGC CGTGGCCGCT
TCGGCCAGCT TCCTGACACC CATCGGCTAT CAGACCAACC TGATGGTCAT GTCGGCCGGA
GGGTATCGCT TCAGCGATTA CCTGAAGGCG GGGGCTCCGG CGGCTGCGCT GGTTTTCGTG
GTCGGACTGA CCATGATTTC GTTAACCTGG CTGTAA
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| Protein sequence | MEALGWQAWI TLAAIAAMVV ALVREVARPD LIFLGTLGLL LLTGVLTPQE AFAGFSNPAV
LTVAALFVVA AGLQRTEALA FVDRILFPRR PSTGRAVLRL MAPVSALSAF LNNTPIVAML
MPRVQQWAER HNLAPSKLLI PLSYAAIVGG MITLIGTSTN LVISGLMIQA GLPGLRMFDL
TWVGLPVAVA VILFFALIGH RLLPDRRRDR GGFEEGLKEC LFELRVTPGG HLEGKTVEEA
GLRALGEAYL VHIRRSGRVI PAAPEQVLQG GDMLTFVGSA RMIERLLERD GLERALPSVE
ENATQTLPLF EAVVAPSSNL VGKTLREVQF REQYGGVVLG IQRQGQRIVG SLGRIPIEAG
DLLLIEARNG FDRRWNARRD EFYLVAPRSP ERPRPRPRHA PIALAIFAGM VLLAGLGWVP
LVTAAFAAAL GMVATRCLSG SEARQALDLQ VLVVIAAALG IGQAVDRSGL AAALGHGLVT
LTADLGPVAA LAVLYLVTMV LTELFTNNAA AALMLPVALA VAGELGLEPR AFAITIAVAA
SASFLTPIGY QTNLMVMSAG GYRFSDYLKA GAPAAALVFV VGLTMISLTW L
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