Gene Rmar_1822 details

Gene Information

• Locus tag: Rmar_1822
• ID: 8568474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2130362
• End bp: 2130964
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 67%
• Product: LemA family protein
• Protein accession: YP_003291093
• Protein GI: 268317374

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.29832
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAAGCA AAGGACTGCT GGCGCTGGTT GTGGTGGTGC TGCTGCTCGG TATGGCCGGC 
TGTGCCGGCT GCAGCGCCTA CAACCGCATG GTGGAAGCCG ACGAGATGGT GGCCCGCGCC 
TGGGCCGACC TGCAGGCGCA GTATCAACGC CGCGCCGATC TGATTCCCAA CCTGGTGCGG 
ACGGTGCAGG CTTCGGCCAA CTTCGAGCGC GAGACGCTGG AGGCCGTTAC GAACGCGCGG 
GCGCGCGCCA CGTCGATCAC GCTGAGCGTC GAGGACCTGA GCGATCCGGA GAAGGTGCGG 
CAGTTCCAGG AGGCGCAGGC GCAGCTTTCG AGCGCGCTGG CCCGGTTGCT GGCCGTGGCC 
GAAAATTACC CGCAATTGCA GACCACGGAG GCCTTCCGTG ATCTGCTGGT GCAGCTCGAA 
GGCACGGAAA ACCGGATCGC CGTGGCCCGA CGCGACTACA ACGAGGCCGT GCGGCGCTAC 
AACACGCTGG TCCGGCGATT CCCGACGGTG CTGGTGGCCA GCCTGACGGG CTTTGCGCCC 
AAGCAGCCGT TCGAGGCGGC CGAAAGCGCT CAGGAAGCGC CGGAGGTAGA ATTCGATCTC 
TGA 

 

Protein sequence

MRSKGLLALV VVVLLLGMAG CAGCSAYNRM VEADEMVARA WADLQAQYQR RADLIPNLVR 
TVQASANFER ETLEAVTNAR ARATSITLSV EDLSDPEKVR QFQEAQAQLS SALARLLAVA 
ENYPQLQTTE AFRDLLVQLE GTENRIAVAR RDYNEAVRRY NTLVRRFPTV LVASLTGFAP 
KQPFEAAESA QEAPEVEFDL