Gene Rmar_1810 details

Gene Information

• Locus tag: Rmar_1810
• ID: 8568462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 2119736
• End bp: 2121820
• Gene Length: 2085 bp
• Protein Length: 694 aa
• Translation table: 11
• GC content: 64%
• Product: alpha-glucan phosphorylase
• Protein accession: YP_003291082
• Protein GI: 268317363

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCATGA CCACCCGTGA TAAACTGGAA GCCCTGGCGG CTAACCTCTG GTGGAGCTGG 
AATCCCGAAG CGCTCCAGCT TTTCGAGCGG CTGAACCCGG AAGCCTTTCG GGTTTCGCAC 
CACAATCCAC TGGCGGCGCT TCGCGCAGCC GACCCGGCTA TGCTGAACGA TCGGCCTTTT 
CAGAAAGAAG TCGATCGCAT CTACGAGGCC TTTCAGGCCT ATCTCAACAG CCCACCGCGC 
CTTGAGAATG CCCCGCGCAC CGTCTATTTC TGCATGGAAT ACGGCCTGCA CGAAAGCCTG 
CCTTTCTACG CGGGCGGACT GGGCGTGCTG GCCGGCGATC ATATCAAGGC CGCCTCGGAC 
CTGGGCATTC CCATGACGGC CGTCGGGCTG TTTCTGCGCG AGGGATACTT CCGCCAGCGC 
TTCGACCACA GCGGCTGGCA GCTGGCCGAC TATCCGGCCA TGGACCCGCT CGACCATCCC 
ATGTCGCTGG TTCACGGGCC GGACGGCTAC CCGCTGGTGA TCACCGTACA TCTGGGCCGT 
CAGCCGCTCT ACCTGCGGGC CTGGAAACTG GAAGTCGGTC GCGTGCCGCT GTACCTGCTC 
GATGCGTCGT TCGATGCCAA CCCCGAGCCG CTGCGCATCC TGACGCGCCG GCTCTACCAG 
GGCGACCGTC GCATCCGCCT CCAGCAGGAA ATCATTCTGG GCATCGGCGG CGTGCGCCTG 
CTGCGAGCTC TGGAGCAGGA CTTCGACGTC TATCACATGA ATGAAGGACA CTGCTCCTTT 
GTCACGCTGG AGCTGCTGCG CGAGCGGCTG GCGTCCGGCG ACGAACGCGA GGCGGCCGAG 
GCCTGGGTGC GTCAGCACTG CGTCTTCACC ACGCACACGC CCGTCATGGC CGGGCACGAC 
CGCTTCGATC CGGGCCTGTT GCTGGAGCAG ATGGAGACGT TCCGGCACCA GCTCGGACTG 
TCCGAAACCG ACCTGCTGGC CTACGGCCGC GTCAATCCCA GCGACAGCAC CGAGGCGTTC 
AACATGACGG TGCTGGGCCT CAAGATGTCG CGCAAGTCCA ACGGGGTTTC GGCCATCAAC 
GGCCTGGTGG CGCGCCGCCA GTGGCACCAC CTGTACCCGG ACCGCCCGGT CAACGAGGTG 
CCGATCGGCC ACATCACCAA CGGCGTGCAC CTGCCCACCT GGACCGTCCC CCACGCCCGC 
CCCTTCCTGG AGCAGCACCT GGGCGACTGG CTCGAAGGCC GCTTCAACCT CGAGATCTGG 
AAGAAAGTGG ACGATATTTC GGACGCCGAG CTGTGGCAGT ACCGGTGCAT GCTGCGTCGG 
CGGCTGGTGG AGTTTGTCAA CGAATACGTC AAACACCAGT CGCTGCCCCA GGAGTCGCAC 
CTGAACCCCG ACGTACTGAC GATCGGTTTT GCGCGGCGCT TTGCCACCTA CAAGCGGGCG 
CCGCTGCTTT TCGAGGACAT GGAGCGGGCC ATCCAGCTCT TCACCCGGGA AGACCGGCCC 
ATCCAGGTGA TCTACTCTGG CAAGGCGCAT CCGGCCGACG ATGGCGGCAA ACGTTTCATC 
CAGCAGATCT ACGAGATCAC ACAGCATCCG GCCTTCCGGG GCAAGGTGGT CTTTGTCGAG 
GATTATGACA TGCACATTGC CCGCATGCTC GTTTCAGGCT GCGACGTGTG GCTGAACAAC 
CCGCGTCGTC CGCTGGAGGC CAGCGGCACC AGCGGCCAGA AGACGGCCAT CCACGGCGGG 
CTGAACCTGT CGGTGCTGGA CGGCTGGTGG CCCGAGGCGT ACAACGGCCA GAACGGCTGG 
GCTTTCGGCC GCGAGGCAAC CGGCTACTAC GAAGATCCCG TCACGCAGGA TGTGGAAGAC 
CGCGAGGCGC TCTATCGCGT GCTCGAGTAC GAGGTGATTC CGGCCTTCTA CGAACGCAAC 
GGCGAGGGGC TGCCGATCCG GTGGCTGACC CGCATGCGCC AGGCCATGCG CACCATCCCC 
GCCCGCTTCA ATGCCGTGCG CATGGTGCGC GAGTACGTGG AGCAGATTTA CCGACCGGCC 
GAAGCGCCTA CACCGGTCAC CGCAACGATC AAGAACGAGA AGTAA 

 

Protein sequence

MPMTTRDKLE ALAANLWWSW NPEALQLFER LNPEAFRVSH HNPLAALRAA DPAMLNDRPF 
QKEVDRIYEA FQAYLNSPPR LENAPRTVYF CMEYGLHESL PFYAGGLGVL AGDHIKAASD 
LGIPMTAVGL FLREGYFRQR FDHSGWQLAD YPAMDPLDHP MSLVHGPDGY PLVITVHLGR 
QPLYLRAWKL EVGRVPLYLL DASFDANPEP LRILTRRLYQ GDRRIRLQQE IILGIGGVRL 
LRALEQDFDV YHMNEGHCSF VTLELLRERL ASGDEREAAE AWVRQHCVFT THTPVMAGHD 
RFDPGLLLEQ METFRHQLGL SETDLLAYGR VNPSDSTEAF NMTVLGLKMS RKSNGVSAIN 
GLVARRQWHH LYPDRPVNEV PIGHITNGVH LPTWTVPHAR PFLEQHLGDW LEGRFNLEIW 
KKVDDISDAE LWQYRCMLRR RLVEFVNEYV KHQSLPQESH LNPDVLTIGF ARRFATYKRA 
PLLFEDMERA IQLFTREDRP IQVIYSGKAH PADDGGKRFI QQIYEITQHP AFRGKVVFVE 
DYDMHIARML VSGCDVWLNN PRRPLEASGT SGQKTAIHGG LNLSVLDGWW PEAYNGQNGW 
AFGREATGYY EDPVTQDVED REALYRVLEY EVIPAFYERN GEGLPIRWLT RMRQAMRTIP 
ARFNAVRMVR EYVEQIYRPA EAPTPVTATI KNEK