Gene Rmar_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1800 
Symbol 
ID8568452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2108561 
End bp2109769 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID 
ProductPhosphoglycerate kinase 
Protein accessionYP_003291072 
Protein GI268317353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACGC TTCGCAAACT GACCATCGAC GACCTGGACG TCAAAGGCAA GCGTGTGCTG 
GTCCGGGTCG ATTTCAACGT GCCCCTGAAG GAAGACGAGC AGGGCAACCT GGTCGTCGCC
GACGACACAC GTATCCGGGA GGCGCTGCCC ACGATCCGGG CGCTCATGCA GGCCGGCGCC
AAGGTGATCC TGATGAGTCA TCTGGGTCGT CCCAAAGGGC AGCCCGATCC CAAGTACAGC
CTGGCACCGG TGGCCCGTCG GCTCGAAGAG TTGCTGGGCG TGCGCGTCCG CTTCGTGAGC
AACATCGTGG GTGAAGCCGT GCGCCAGGCC ATCAACAGCA TGCCCGAAGG CGGCGTGATC
CTCCTGGAAA ACACGCGCTT CCATCCGGGC GAGACGAAAA ACGATCCGGA GCTGGCCCGC
CAGCTGGCCG AACTGGCCGA CGTGTACGTG AACGACGCCT TCGGCTCGGC GCACCGCGCG
CATGCCTCGA CCGAAGGTGT GGCCCACTAC GTCAAGCAGG CGGCCATGGG CTACCTGATG
AAACGCGAGG TGGAATACCT GAGCCGCCTG CTCGAAAACC CCGAGCACCC GTTCGTGGCC
ATCCTCGGCG GGGCGAAGGT TTCCGACAAG ATCGGCGTGA TCAAGAACCT GCTGCCGCGC
GTCGATCGCC TGCTCATCGG CGGCGCCATG AGCTACACGT TCCTCAAGGC GCTGGGCCAC
AACGTGGGCG CCTCCCGCGT CGAAGAAGAC CGCCTGGAAG AAGCGCGCCA GCTCTACGAG
GAGGCTCAGG GTAAAATCCT GCTGCCCGTC GATCACGTGG TGGCACCCGA GTTCTCCAAC
GAAGCGCCCG CTCAGGTCGT CGAAGGCGAC ATCCCGGACG GCCTCATGGG GCTGGACATC
GGTCCGAAAA CCATCGAGCG CTACCGCGAG GAAATCCTGC AGGCCCGCAC GGTGGTCTGG
AACGGCCCCA TGGGCGTTTT CGAAATGCCC AACTTTGCGA AGGGCACATT TGCCATCGCC
GAGGCGCTGG CCGAGGCCAC CGACCGGGGC GCCCTGACCG TGGTGGGCGG CGGCGACTCG
GTGGCCGCCA TCACTCAGGC CGGTTACGCC GACCGCGTGA GCCACGTCTC GACCGGCGGC
GGTGCCATGC TGGAGTTCCT GGAAGGCAAG GAACTGCCCG GCCTGGTCGC GCTGACCGAC
AAAAAGTAA
 
Protein sequence
MSTLRKLTID DLDVKGKRVL VRVDFNVPLK EDEQGNLVVA DDTRIREALP TIRALMQAGA 
KVILMSHLGR PKGQPDPKYS LAPVARRLEE LLGVRVRFVS NIVGEAVRQA INSMPEGGVI
LLENTRFHPG ETKNDPELAR QLAELADVYV NDAFGSAHRA HASTEGVAHY VKQAAMGYLM
KREVEYLSRL LENPEHPFVA ILGGAKVSDK IGVIKNLLPR VDRLLIGGAM SYTFLKALGH
NVGASRVEED RLEEARQLYE EAQGKILLPV DHVVAPEFSN EAPAQVVEGD IPDGLMGLDI
GPKTIERYRE EILQARTVVW NGPMGVFEMP NFAKGTFAIA EALAEATDRG ALTVVGGGDS
VAAITQAGYA DRVSHVSTGG GAMLEFLEGK ELPGLVALTD KK