Gene Rmar_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1790 
Symbol 
ID8568442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2098326 
End bp2099648 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content67% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003291062 
Protein GI268317343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCT GCAGCGTGGT GGGGCTGCTG CTCTGGGGCG TGCTGGCCTG CCGGGCCCAG 
CCGACGCCCG AGCCGATCAC GGCGTTCGTG CACGTGAACG TGCTCCCGAT GGATCGCGAC
ACGGTGCTGC GCAATCAGAC CGTGCTGGTG CGGGGTACGC GTATCGTGGC CGTGGGACCG
GCCGCTTCCG TGGAAATCCC CGAAGGCGCC CGTCAGATCG ATGGCACGGG CCGCTACCTG
ATGCCGGGAC TGGCCGAAAT GCACGGACAC GTCCCCGGCG GTAACGCACC GGCGCAGTAC
GTCGAGGACG TGATGTGGCT CTACGTGGCC AACGGGGTAA CGACGGTGCG CGGCATGCTG
GGCGATCCGG CGCAGCTCGA CCTGCGGACG CGCATCAACC GGGGCGAGCT GGTCGGTCCC
ACGCTGTATC TGGCCGGGCC ACCTTTCAGT GGCAATTCGG TCACCTTGCC AGCGCAGGCC
GTGGAAATGG TGCGTCGCCA GAAGGCCGAA GGGTGGGATC TCTTGAAAGT GCTGCCGGGC
CTGAGTCGGG AGGTCTACGA CGCCATGGCG CGTACGGCGC ACGAAGTAGG GATTCGCTTT
GCCGGACACG TGCCCGAGGC CGTCGGACTC CGGCATGCGC TGGAGATGGG GCAGGAAACG
TTCGATCACC TGGACGGCTT CATCGCCTAC CTGGACGCGT TCGACAGACC GATCGACGAG
GCCCGCCTGC AGGAGATCGT CCGCCTGACA CGCGAGGCGC AGGCCTGGGT GGTGCCGACC
ATGGCGCTCT GGGAAGTGCT GATGGGGGTG CTGGATCTGG AAACGGTTCA GGCCTACGAC
GAATTGCGCT ACATGCCGCC GGAGATCGTC GAACGCTGGA TCGAGGCGCA CAGGCGGCGG
CTGGCCGATC CACAGCTCGA CCGCGAGGCG GCCCGCCGGC ACATCGCCAA CCGCATGCGG
CTGCTCAAGG CGCTGGCCGA CGGTGGCGTG GGCATTCTGT TCGGCACCGA CTCGCCGCAG
CAGTTCAGCG TGCCGGGCTT CTCGGTGTAT CGCGAGATCG AACGCATGGA GGCGGCCGGG
CTGACACCCT ACCAGATCCT GCGCGCGGCC ACCTACAACG TCGGCCGCTA CTTCCAGCGG
CACGACAGCT TCGGCGTGGT GGGCATCGGA CACCGGGCCG ACCTGATCCT GCTGGAGGGC
AACCCGCTCG AAGATCTGAA CCACCTGAAG CAGAAAGTGG GCGTCATGGT ACGGGGCCGC
TGGGTGCCCG CTTCGGAGCT GCGGGCGAAA CTGGATGAGA TCGCCGCCCG CTACGCCCGA
TAA
 
Protein sequence
MKICSVVGLL LWGVLACRAQ PTPEPITAFV HVNVLPMDRD TVLRNQTVLV RGTRIVAVGP 
AASVEIPEGA RQIDGTGRYL MPGLAEMHGH VPGGNAPAQY VEDVMWLYVA NGVTTVRGML
GDPAQLDLRT RINRGELVGP TLYLAGPPFS GNSVTLPAQA VEMVRRQKAE GWDLLKVLPG
LSREVYDAMA RTAHEVGIRF AGHVPEAVGL RHALEMGQET FDHLDGFIAY LDAFDRPIDE
ARLQEIVRLT REAQAWVVPT MALWEVLMGV LDLETVQAYD ELRYMPPEIV ERWIEAHRRR
LADPQLDREA ARRHIANRMR LLKALADGGV GILFGTDSPQ QFSVPGFSVY REIERMEAAG
LTPYQILRAA TYNVGRYFQR HDSFGVVGIG HRADLILLEG NPLEDLNHLK QKVGVMVRGR
WVPASELRAK LDEIAARYAR