Gene Rmar_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1788 
Symbol 
ID8568440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2096587 
End bp2097540 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003291060 
Protein GI268317341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.703394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAG CTGCTGTCGA AATCGAAGCG CTCACGTTTC GCTACGGCTC CCGCCTCGCC 
CTTCGATCGC TCTCGCTCCG CATTCCTTCC GGTTGTTGCT TCGGGCTGCT GGGCCCTAAC
GGTAGCGGCA AGACCACCCT GATGCGGCTG CTGGCCACGC TGCTGCAACC CGCGGAAGGC
CGCCTGCGGG TATGCGGTCA CGACACGGTG GCGGCACCCG GGGCGGTTCG CCGCTGCCTG
GGCGTGGTCT TCCAGCAACC GGCGCTCGAC GGCGACCTGA CCGTAGAGGA AAACCTGCGG
CTGCACGGCG CCTTCTACGG CCTGCGGGGT GAGCCGCTCC GAAATCGCAT CGACGAGCTG
CTGACGCGCT TCGGTCTGCA GGAGCGACGG CACGAGCCGG TACGGCGTCT GTCGGGCGGC
CAGCAACGCC GCGTCGATCT GATACGGGGT CTGCTGCACC ACCCCCGTGT GCTGCTGCTC
GATGAGCCCA CGACCGGGCT GGATCCGCTG GCGCGCCATG CCTTCTGGCA AACGCTCCGC
CAGTTGCGCC AGACGGACCG GCTGACGCTG ATCGTGGCCA CGCACCTGCT GGAAGAAGCC
GAGTTGTGCG ACGAAGTCGC GCTACTCGAC GAGGGCCGCC TGGTCGCTGC CGGAGCCCCC
GATGCGCTAG CCCGGGCCCT CGGCGACGAG GTGCTCTGGC TGGAAACGTC CGAACCCGAA
GCCGTTGCGG CCTTCGTTCA GACCCACTTC GGCGTCGAGG CCCGCGCGAT CGGCGCCGCG
GTGCGCGTGG CCGCCCCCGA CGCGCATGCC CTGCTCCCGC GCCTCTACGA AGCACTGGGT
GATCGGCTGC GGAGCGCGAC CGTGCGGCGT CCCACGCTCG AAGACGTATT TCTGGTGCAC
ACGGGCCATC ATCTGCACGC TTCGCCAGAA TCCTTTACGG CACCGGTCTC ATGA
 
Protein sequence
MSEAAVEIEA LTFRYGSRLA LRSLSLRIPS GCCFGLLGPN GSGKTTLMRL LATLLQPAEG 
RLRVCGHDTV AAPGAVRRCL GVVFQQPALD GDLTVEENLR LHGAFYGLRG EPLRNRIDEL
LTRFGLQERR HEPVRRLSGG QQRRVDLIRG LLHHPRVLLL DEPTTGLDPL ARHAFWQTLR
QLRQTDRLTL IVATHLLEEA ELCDEVALLD EGRLVAAGAP DALARALGDE VLWLETSEPE
AVAAFVQTHF GVEARAIGAA VRVAAPDAHA LLPRLYEALG DRLRSATVRR PTLEDVFLVH
TGHHLHASPE SFTAPVS