Gene Rmar_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1781 
Symbol 
ID8568433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2086995 
End bp2088140 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003291053 
Protein GI268317334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.290069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCGC TGCGCATGAT CGCGACGCTG TTCGTCAAAG AATTCACCCA GATCCGGCGC 
GATCCGCTCT CGCTGGGGAT GCTCATCGCG CTGCCGGCCT TTCTGCTGAT TCTGTTCGGC
TACGCGCTCA CGTTCGACGT GCGCAACCTG GCGCTGGGCG TGTGCGACCA GGACGGGTCG
GCGGCCAGCC GCGAGCTCAT CCGACGCTTT GCGATCACCG AATACTTCGA CCTGAAACGT
CAGGTGGACG ATCCGCGGGC GCTCACGCGG CTCATCGATC ACGAGGTGAT CCAGGTGGGT
CTGGTCATTC CGCCGGACTT CGAGGAGCGG CTCGAGGCGG GACGTCCGGC GCCGGTTCAG
TTTCTGGTGG ACGGCACGAA CGCCACGATC GCCTCGGCCG TCACGGGCTA CGCCGATGCC
ATCGTCCGGG CATTCAGCGG CCAGGTGGTG CTGGAACAGA TGCTGCGCGC CGGGCACCGT
CCGCCGCCGG CGGCCGTCTC CGTCGAGGCC CGCATCTGGT ACAACCCCGA GCTGGAAAGC
GCCCGCTTCC TGCTGCCCGG TCTGATCGCC TTTCTGCTCA TGGTAGCCAC GGTGGTGGCC
ACATCGCTTT CGGTTACGCG CGAGCGGGAA CGTGGCACCA TGGAGCAGCT CGTGCTGGCC
CCGCTGGAGC CCTACCAGCT CGTGCTGGGC AAGACGCTGC CCTATCTGCT GGTGGCGATC
GGCTCGACCA TCTTGATCCT GCTCGTCGGA CGCCTGCTGT TCGACGTGGA AGTGCGCGGC
GAGTTGCTCG TGCTGGCCTT CGTGGTGCTG GCCTACCTGC TGGCCGGTCT CGGCCAGGGC
CTGTTGATTT CGACCGTCGC GCCCAGCCAG CAGGTAGCCT TTCAGATTGC CATCATCAGC
ACGCTATTGC CCACGTTCAT CCTCTCGGGC TTCGTTTTTC CCATTTACAA CATGCCGCCG
GTCATCCAGG CCCTCACCTA TCTGGTGCCG GCCCGCTACT TCCTGGTGGC GCTGCGGGGA
GTGATGCTGA AAGGAACCGG GCTGGCCGTT TTCTGGCCCG ATGTGCTGCT GCTGTTGCTT
TTTGCAGGGC TCATGCTCAC GCTGAGCAGC ATTCGCCTGC GCCGTCTGTT TCAACACCTG
ATGTGA
 
Protein sequence
MAALRMIATL FVKEFTQIRR DPLSLGMLIA LPAFLLILFG YALTFDVRNL ALGVCDQDGS 
AASRELIRRF AITEYFDLKR QVDDPRALTR LIDHEVIQVG LVIPPDFEER LEAGRPAPVQ
FLVDGTNATI ASAVTGYADA IVRAFSGQVV LEQMLRAGHR PPPAAVSVEA RIWYNPELES
ARFLLPGLIA FLLMVATVVA TSLSVTRERE RGTMEQLVLA PLEPYQLVLG KTLPYLLVAI
GSTILILLVG RLLFDVEVRG ELLVLAFVVL AYLLAGLGQG LLISTVAPSQ QVAFQIAIIS
TLLPTFILSG FVFPIYNMPP VIQALTYLVP ARYFLVALRG VMLKGTGLAV FWPDVLLLLL
FAGLMLTLSS IRLRRLFQHL M