| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1770 |
|---|
| Symbol | |
|---|
| ID | 8568422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2072588 |
|---|
| End bp | 2073514 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003291042 |
|---|
| Protein GI | 268317323 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.471072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG TACGCGAGCT GACGAAGCGT TACGGGTCGG AGGTGGCCGT CGACCGCATC
TCGTTCACCG TGCGGTCGGG CGAGGTGCTG GGCTTTCTCG GTCCCAACGG GGCCGGGAAG
ACCACCACGA TGAAGGTGAT CACCTGCTAT TTGCCTCCGA CCGAGGGCAC CGTCCTGGTG
GACGGGCTGG ACGTGCGGCA CGACAGCCTG GCCATCCGCC AGAAGATCGG CTACCTGCCC
GAAAACACGC CGCTCTATCC CGACATGGTC ACCTACGACT ATCTGGAGTT CATGGCGGCC
ATGCGGGGGC TCGATGGCGC GGCGCGGCGG CGTCGTCTGG CCGAGGTGAT CGAGGTGTGC
GGGCTGGGCG ACGTGCTCAC CAAGCGCATT GATGCGCTCT CGAAGGGATA CCGCCAGCGC
GTCGGGCTGG CGCAGGCCAT GGTGCACGAC CCGCCCATCC TGATCCTGGA CGAGCCGACC
TCGGGGCTCG ACCCCAACCA GATCGTGGAG ATCCGAAGCC TGATCAAGAC GCTCGGGCGC
GAAAAGACCG TCATCCTCTC GACGCACATC CTCCCCGAGG TACAGGCTTC GTGCGACCGC
GTGCTGATCA TCCACCGCGG GCGGATCGTG GCCGACGGCA CGCCCGACGA GTTGCAGTCG
GCGCACGGCG GCCAGCGCAT TCTGTTCGGC GTGCAGGCGC CGGAGCCCGA AGTGCGATCG
GCCCTGGAGC GGGTGGACGG CGTGCGCGTG GAGGAGGCGC GGACGGAAAG CGACGGCACG
CTGCTGCTGC GCCTGAGTGC CGACGGCCAG AAAGACCTGC GGCCGGAGCT GTTCCGCCTG
GTCGTCGAGC GCGGCTGGAC GCTCACCGAG CTCCATCGGG AGCGTGTCGA TCTGGAGGAG
GTCTTCCGCC AGCTCACGAT GAACTAA
|
|---|
| Protein sequence | MIEVRELTKR YGSEVAVDRI SFTVRSGEVL GFLGPNGAGK TTTMKVITCY LPPTEGTVLV
DGLDVRHDSL AIRQKIGYLP ENTPLYPDMV TYDYLEFMAA MRGLDGAARR RRLAEVIEVC
GLGDVLTKRI DALSKGYRQR VGLAQAMVHD PPILILDEPT SGLDPNQIVE IRSLIKTLGR
EKTVILSTHI LPEVQASCDR VLIIHRGRIV ADGTPDELQS AHGGQRILFG VQAPEPEVRS
ALERVDGVRV EEARTESDGT LLLRLSADGQ KDLRPELFRL VVERGWTLTE LHRERVDLEE
VFRQLTMN
|
|---|
| |