Gene Rmar_1760 details

Gene Information

• Locus tag: Rmar_1760
• ID: 8568412
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2056547
• End bp: 2059909
• Gene Length: 3363 bp
• Protein Length: 1120 aa
• Translation table: 11
• GC content: 65%
• Product: ASPIC/UnbV domain protein
• Protein accession: YP_003291032
• Protein GI: 268317313

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCATC GCTTCTTGCT GCGTGGTTTC CGGAGCCTCG GTCTGGTGGG ATTGCTCGTG 
CTGGGAGGGT GTCGCAAGCC CGGCGTGCCC GCCGACGCCC TGTTTGAGGA ATTATCCCCA 
CGCCAGACGG GCATTCGCTT CGAAAACCGC CTGCGCGAAA CGCAGGAGTT CAACGTCTTT 
ATCTACCGCA ACTTTTACAA CGGCGGAGGC GTCGGGCTGG CCGACTTCAA CGGCGACGGA 
CAACTGGACG TCTTTCTGAC GGCCAACCAG GGTCCCAACC GGCTTTACCT GAACCGGGGC 
GACTGGCGCT TCGAGGACGT CACCGATGCG GCCGGCGTGG CCGGAACGAA GCCCTGGACC 
ACCGGCGTGG CCGTGGCCGA CGTCGATGGC AACGGCTGGC CCGATCTGTA CGTGTGCCAT 
GCCGGACCGT TTGCCGACAG CCTCCGCGCC AACGAGCTCT ATCTGAACCT GGGGCCCGAC 
GCGAACGGCA TCCCGCGCTT CCGGGAGGCG GCCGCCGAGC TGGGCCTGGC CGACACGGGC 
TTTTCGGTCC ATGCCGTCTT CTTCGACTAC GACCGGGACG GCGACCTGGA CGTCTACGTC 
CTGAACAACT CCATGCGGCC CATCATCAGC CTGGACTTCC GCAACACGCG TCACGAACGC 
AATCACGAAG GAGGCGACCG CCTCTACCGC AACGACGGCG GCCGCTTTGT GGACGTCAGT 
GCCGAGGCCG GCATTTTCGG GCCGGAGATT GCCTTCGGGC TGGGCGTGAC CGTGGCCGAT 
CTCAACCGCG ACGGCTGGCC CGACCTCTAC ATCTCCAACG ACTTTTTCGA GCGCGATTAC 
CTCTATATAA ACCAGAGCGA CGGCACCTTC CGGGAAGTGC TGGAAGAGGC CATGGCGTCG 
ATCAGCCTCT CGTCCATGGG CGCCGATGCG GCCGACATCG ACAACGACGG CTTCCCGGAG 
CTTTTCGTGA CGGACATGTT GCCCGAGGAC GACGCCCGCC TGAAGACCAC GACCACCTTC 
GAGGGCTGGC AGCTCTACCA GACCAAGGTG GAAAACGGTT TTTACCATCA GTTTACCCGC 
AACACGCTCC AGTACAACAA CGGCGACGGC ACCTTCAGCG AGATCGGCAT GTGGGCCGGT 
GTGGCCGCTA CCGACTGGAG CTGGGCCGCG CTGATCTTCG ATGCCGACCT GGACGGCTAC 
AAAGACATCT TTGTGGCCAA CGGCATCTTC TGGGATGTGA TCGATCAGGA TTATCTCGAA 
TACCTCTCGG CCGAAGAGAC GATGCGGGCG GTGATCCGTG AGGAAGGCGT CGACTACCTG 
GCGTTGATTC GAAAAATGCC CTCGCACCCG CTCCCGAACT ATGCCTTTCA CAACAACGGC 
GACCGCACCT TCACGAACCG GGCGCAGGAA TGGGGCCTAG GACGGCCGGG CTTCTCCAGC 
GGGGCCGCCT ACGGGGATCT GGACGGTGAC GGCGACCTGG ACCTGATCGT CAACGACGTG 
AACAGTCCGG TGCGCGTCTA TCGCAACCGG GCGCGCGAGC GATCCGGCGG ACATTTCCTG 
CAGGTACAGC TGATCGGCAC GCCGCCCAAC ACGCAGGGGA TCGGTGCGCA GGTGACCGTG 
CTGGCCGGGA CGCAGCGCTT CTATCAGGAG CAGATGCCCA ACCGGGGCTT CCAGTCGTCG 
GTGGATCCGG TGCTGACGTT CGGACTGGGC CCGCACGACA CAGGCGATGC CGTGGTCGTG 
GTCTGGCCCG ACGGCCGCCA CGAGGTGCGC CGAAATGTGG CCGCCGACCG GCGACTGGTT 
TTTCGCCAGG ATGAGGCCAC AGTGGGCCGA CCTGAACTGC CGTTGTTGCC GGAGCGGGCA 
ACGCCACGTT TTGCCGACGT GACGGCGCAG GTGGCGCTCG ATTATCGGCA TCAGGAGGAT 
AACTTCGTGG ACTTTCTGCG CGAGGGGCTC ATGCCCTGGA TGCGCTCGCG CGAAGGACCC 
CGGATGGCCG TGGGCGACGT GAACGGCGAC GGCCGCGACG ATTTCTACAT CGGCGGGGCC 
AAGGGTTTCC CTGGCGTGCT CTTCGTGCAG CAGCCCGACG GGCGCTTTGT GCGCGCCAAC 
GAGGCGCTGT TTGCCGCCGA TGCGCTCTCG GAAGACCTGG GCGCCACGTT TTTCGACGCG 
GACGGCGACG GCGACCTGGA CCTGTACGTG GTCAGCGGCG GCAACGCCTA TGCGCCCCGC 
GCTCCGGCGC TTCAGGATCG GCTGTATCTG AACGACGGCC GGGGCCGCTT CCGGAAGGCC 
GTGGATCGGC TACCCCGGAT TCGTAGCAGC GGCGGACCCG TCGTGGCTGC GGACTACGAT 
GGCGACGGCG ACGTCGATCT GTTCGTCGGC GGCCGGATCG AGCCCTGGTT TTACGGCATG 
GCGCCCGAGA GCCTGCTGTT GCAGAACGAC GGCCGCGGGC ATTTTACAAA CGTTACCGAA 
ACGCTGGCGC CCGGTCTGTC CCGCATCGGC ATGGTCACCG ATGCGGCCTG GACCGACTTC 
GACGGCGATG GCCGGCTCGA TCTGCTCGTC GTGGGCGAGT GGATGCCGCT TACGATTTTC 
CGAAATGTCG GTGGGGGGCG GCTGGAACGC TGGGAGTTGC CCGATCTGGC CGAAACCTCG 
GGCATCTGGC ATCGCGTGGC CGTGGCCGAC TTCGACGCCG ACGGCGATCC GGACTTCATC 
GCCACCAATC TGGGCTTGAA CACGCCGCTG AAGGCATCTC TGGAAAGCCC ACTCCGTCTT 
TTTGTGAAAG ACTTCGACCG GAACGGCTTT GCCGATCATC TGCTGACCCG CCCCGAGAGT 
ACGGCGGCCG GGCTTCGTCA CCGTCCCCTG AACCTGCGTC GCGAACTGCT CGGTCAGCTT 
CCCTTCCTGA GCGGCCGCAT TCCTTCTCAT GCCGCCTATG CGCGCATGAT GCTGGAAGAC 
ATCCTGAAGC CGGAGGAACT GGAGGGAGCC GCCGTGCTGG AAGTCCGCGA ATTGCGCAGC 
CTGTACGTGG AAAATCTCGG CGGCGGACGC TTTCGGCTGC ATCCGCTCCC GCCCGAGGCG 
CAGTGGGCGC CGCTCTACGG GCTGCTGGTG GATGATTTCG ACGGCGACGG CCACCTGGAC 
GTGCTGGCCG GAGGCAACTT CCGTTGGGCG CAGACCAGTC TGGGCCTGAT GGAAGCGACT 
TACGGCCTCT GGCTCCGGGG CGATGGGGCC GGGCATTTCA CGGCGGCCAT GCCTCGGGAC 
AGCGGCTTTT TCGTGCGGGG TGAGGTGCGG GACGTTCAGA AACTGACCCG CCCGGGCCGG 
CCTCCGCTGA TCCTGGTGGC CCGCAACGAC GACACGCCCC GGTTTTTTGT CGTACGACGG 
TAA 

 

Protein sequence

MMHRFLLRGF RSLGLVGLLV LGGCRKPGVP ADALFEELSP RQTGIRFENR LRETQEFNVF 
IYRNFYNGGG VGLADFNGDG QLDVFLTANQ GPNRLYLNRG DWRFEDVTDA AGVAGTKPWT 
TGVAVADVDG NGWPDLYVCH AGPFADSLRA NELYLNLGPD ANGIPRFREA AAELGLADTG 
FSVHAVFFDY DRDGDLDVYV LNNSMRPIIS LDFRNTRHER NHEGGDRLYR NDGGRFVDVS 
AEAGIFGPEI AFGLGVTVAD LNRDGWPDLY ISNDFFERDY LYINQSDGTF REVLEEAMAS 
ISLSSMGADA ADIDNDGFPE LFVTDMLPED DARLKTTTTF EGWQLYQTKV ENGFYHQFTR 
NTLQYNNGDG TFSEIGMWAG VAATDWSWAA LIFDADLDGY KDIFVANGIF WDVIDQDYLE 
YLSAEETMRA VIREEGVDYL ALIRKMPSHP LPNYAFHNNG DRTFTNRAQE WGLGRPGFSS 
GAAYGDLDGD GDLDLIVNDV NSPVRVYRNR ARERSGGHFL QVQLIGTPPN TQGIGAQVTV 
LAGTQRFYQE QMPNRGFQSS VDPVLTFGLG PHDTGDAVVV VWPDGRHEVR RNVAADRRLV 
FRQDEATVGR PELPLLPERA TPRFADVTAQ VALDYRHQED NFVDFLREGL MPWMRSREGP 
RMAVGDVNGD GRDDFYIGGA KGFPGVLFVQ QPDGRFVRAN EALFAADALS EDLGATFFDA 
DGDGDLDLYV VSGGNAYAPR APALQDRLYL NDGRGRFRKA VDRLPRIRSS GGPVVAADYD 
GDGDVDLFVG GRIEPWFYGM APESLLLQND GRGHFTNVTE TLAPGLSRIG MVTDAAWTDF 
DGDGRLDLLV VGEWMPLTIF RNVGGGRLER WELPDLAETS GIWHRVAVAD FDADGDPDFI 
ATNLGLNTPL KASLESPLRL FVKDFDRNGF ADHLLTRPES TAAGLRHRPL NLRRELLGQL 
PFLSGRIPSH AAYARMMLED ILKPEELEGA AVLEVRELRS LYVENLGGGR FRLHPLPPEA 
QWAPLYGLLV DDFDGDGHLD VLAGGNFRWA QTSLGLMEAT YGLWLRGDGA GHFTAAMPRD 
SGFFVRGEVR DVQKLTRPGR PPLILVARND DTPRFFVVRR