Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1758 |
Symbol | |
ID | 8568410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2049764 |
End bp | 2053033 |
Gene Length | 3270 bp |
Protein Length | 1089 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003291030 |
Protein GI | 268317311 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.208023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTAC TGGCTGCTCT TGGGACAACC GGGGCATGGG CTCAGACCGG TAAGATTGCC GGTCGGGTGG TGGATGCAGA GACAGGGGAG CCATTGCCCG GGGTGAATGT CGTGATTGAA GGAACTACGG TTGGGGCTAC GACGGACATT GACGGGTACT ATACGATCAT CAACGTCCGT CCGGGCACCT ACACACTTCG CGCCTCTTTT GTGGGCTATG TGCCCCAGGT TGTAGAGAAC GTGCAGGTAG ATATTGGCCT GACGACAGAG GTGAACTTCG CGTTGCGTCC GACGGCTATC GGGCTGGAGG AAGTGGTGGT GCAGGCGGAG CGCCCGATCG TGCAACCGGA TATTTCAGCC AGTATTGCTA ATATCGATGC GGCAGTCATT GAAGCGCTCC CGGTAGCTAC CGATGTAGTG CAGGTGATTG GCTTGCAGCC AGGCTTTGAG CCGGGGTTGG TCGTGCGTGG TTTTGGAGGA AATCAGGTGG CTTTTCTGCT TGATGGAATG AATCTGGCTG ATCCGCGTAC GAACGCGCCT TTCACCGGTG TGAGCTTCAC GGCTGTTGAA GAGGTGCAGG CGCAGACGGG TGGCTTTACG GCCGAGTACG GCAACGTGCG GTCAGGGTTG ATCAACGTAG TGATGAAGGA ACCGCGGACG AATCGCTATA CGGTGGATGC CATTTTGCGC TATGCGCCGG CGCAACCCAA GACGTTTAAT GGCGATGCCA ATGACAGGGA TTTCTTCTGG ATGCGGCCGT ACTTTGATCC CGAAGTAGCT ATGATTGGCA CGGAAGCGGC CTGGGACGAT TGGACGGAGC GCCAGTATCC GAAATTTGAA GGATGGGAGG AGGCGGCCAA TGATTATCCA GCCAATAATG ATAGCGATCC TTCTAATGAT GTGACTGCAG CGCAGTTGCA GAAGGCTTAT GAGTGGATGA CGCGGAAGAA TACCGGCATT GATGATCCAG AGTATCAGAT TGACGCTACA ATTACGGGGC CAGTGCCGGC CATTGGGGCT TCACTGGGGA ATTTGCGCTT TCTGGTTTCA CATCGCCGCA CGCAGTCGGC TTACATCATC CCCCAGCGTC GCCGCACTTA TCGGGACTAC ACCACCCAGG CCAAGCTAGT TTCTGATATT GCGGCTGGTG CCAAGCTAGA GCTGGTGGGA CTCTGGTCCA AGCGGAAGGG GCTGGTGCGG CCAATCGCAA TTGACCAGGG GGCAACGAGT ACCATGCTGA GTGGGGATCC CCCAGCCTAT CCCTGGGATT GGCGCTATGA TTTGGAGAAC AGAATTCTGG GCGATGATGG GGTGGAAGGC CACGTAGCGC GTGCCGCACT CTACGGCGAC TGGGTCATTA ATCCAATGGA TATTGACTAT GCGCTCTATG GCGCCAAGTT TACGCATGCG CTGACGCCGA ACACCTTTTA TGAAGTGCAG CTGCAGCGGG TGCAGACGGA TTATCTGACC GGACATATTC CGCCTCGCAA CCCGGATCCT GTGGTATGTG TGACGCCGGA GCCTGCCATT CTTCCCATTG ATGATCCGGC CTGCCAGGCC CCCAACGTCA TTCGTCTGAA TGAGGCGCCC TTTGGCTATG AGTCTAAGGG GGCGCAGGAT GGTCTGAGTG CTAACGGGCT TCGGATCGGC GGGCACGGAG GGGCTGCTTT TGACACCTCT TCTGTGTCAC GGTGGGTGAT CAATGCTTCG TTGACCAGTC AGGTGAACCG CTATCTGCAA ATAAAGGGAG GCTTCGAGTT TCATCTGAGC GACTACCAGA TGAACTACGG GGAGTATGAT CCCTTCTTTG TACACCATGC CAACCCCACG TATCGCTGGC ATCGTAAGCC GCAGCAGGGG GCGGCCTTCC TGCAGAGCAA GCTGGAATTT AAGGGGTTGA TCGCCAATCT GGGGGTGCGG CTGGATTACT TCAATCCAAG CGGCAAGTGG TATGTGTATG AGCCCTATGA TCGTGCCTTT ACGGCAGTAT TTGGAGTCGA TAAGCTCGAT GAGGTGCTGT CTAAAGAGCC GGTAGACAAG CAGCTTACGC TAAGCCCGCG GCTGGGCATC TCCTTCCCGG TGTCGGCCAA TAGTAAGTTG TACTTCAACT ATGGGCATTT CCGGCAGATG CCCGACCCGG TACCGCTCTT TGAGATAGAG CGGATTAATA CGGGAGCGGT GGCGCGCATT GGTAACCCGA ATCTACCCCT GCAAAAAACG GTGGCCTACG AGCTGGGCTT TGAGCAGAAC TTGTTCGACA TGTTTCTGCT TCGCCTAGCC GGTTACTACC GGGACGTATC CAACCAGGTG CGCTTCATCA ACTTCCAGAG CATTGATGGA GAAGTAAACT ATTGGGTAGC GCGCCCTTGG AATTACGGAG ATGTGCGGGG GTTTGAGCTC TCGCTGGCGA AAGATCGCGG GCGGTGGATT CAGGGCTTTA TTAACTACAC CTATATGGCC TGGAAAGGGG GGAATTTTGG TTTTGAGTAC AATTACGAAA ACCTTGTGGC ACAGCAGAAC TATCTGTTGA CCAGCACCGA CCATTATCAG AGCAAACCTG TACCTGAGCC GTATGCACGG GTTAATATTG ATCTGGTCAC CCCCGAAGAC TATGGTCCTA ACTACAACGG AATGCGGCCA CTGGCCGGGT GGCGCCTGAG CCTGCTGGGG ACCTGGCGTG CGGGGCAGGT GCTTACCTGG ACGGGACAAC AGCTGGTTGC CGGGGGGAGT CCGATCCGAG GTATCGAACA GAATGTGCAG TGGAAAGACT ACTACAATCT TGATCTCCGT CTGAGTAAGA CCTTTAACAT GAAGTTCGGA GAAGTGCAGT TTTTCATGGA TGTCTCCAAT GTGCTTAATC TCCGATACAT GGATCGGATG AGTGGCTTTA CCGGGGCAGA TGATCTGCTG GATTACATGA AGTCCCTGCA TCTTCCGGCT AACACCTTTG AAGGGCTGGA GAATCCTCCG TATCAGTTTA TACCTGGCAA CGATCAGCCG GGAGATTATC GGAAGCCTGG GGTTGAATTT GTGCCCATTG AAGTCTGTCC GCCTGCCGGG TGCCAACCGG TTGGGGATGA GCCCACACGC CCGCTATACT ACCAGGATGG CACCTACTAC AGCTACACGG GAAGTGAGTT TGTCGAAGCG GACCCAGACT TCGTGAAGAA GGTGTTGGAT AATAAGGCCT ATATTGACAT GCCTAATGCG GATTATCTGA CCTTCTTCAA TCCGCGCCGT GTATACTTTG GGCTGCGAAT TTCCTTCTAA
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Protein sequence | MLLLAALGTT GAWAQTGKIA GRVVDAETGE PLPGVNVVIE GTTVGATTDI DGYYTIINVR PGTYTLRASF VGYVPQVVEN VQVDIGLTTE VNFALRPTAI GLEEVVVQAE RPIVQPDISA SIANIDAAVI EALPVATDVV QVIGLQPGFE PGLVVRGFGG NQVAFLLDGM NLADPRTNAP FTGVSFTAVE EVQAQTGGFT AEYGNVRSGL INVVMKEPRT NRYTVDAILR YAPAQPKTFN GDANDRDFFW MRPYFDPEVA MIGTEAAWDD WTERQYPKFE GWEEAANDYP ANNDSDPSND VTAAQLQKAY EWMTRKNTGI DDPEYQIDAT ITGPVPAIGA SLGNLRFLVS HRRTQSAYII PQRRRTYRDY TTQAKLVSDI AAGAKLELVG LWSKRKGLVR PIAIDQGATS TMLSGDPPAY PWDWRYDLEN RILGDDGVEG HVARAALYGD WVINPMDIDY ALYGAKFTHA LTPNTFYEVQ LQRVQTDYLT GHIPPRNPDP VVCVTPEPAI LPIDDPACQA PNVIRLNEAP FGYESKGAQD GLSANGLRIG GHGGAAFDTS SVSRWVINAS LTSQVNRYLQ IKGGFEFHLS DYQMNYGEYD PFFVHHANPT YRWHRKPQQG AAFLQSKLEF KGLIANLGVR LDYFNPSGKW YVYEPYDRAF TAVFGVDKLD EVLSKEPVDK QLTLSPRLGI SFPVSANSKL YFNYGHFRQM PDPVPLFEIE RINTGAVARI GNPNLPLQKT VAYELGFEQN LFDMFLLRLA GYYRDVSNQV RFINFQSIDG EVNYWVARPW NYGDVRGFEL SLAKDRGRWI QGFINYTYMA WKGGNFGFEY NYENLVAQQN YLLTSTDHYQ SKPVPEPYAR VNIDLVTPED YGPNYNGMRP LAGWRLSLLG TWRAGQVLTW TGQQLVAGGS PIRGIEQNVQ WKDYYNLDLR LSKTFNMKFG EVQFFMDVSN VLNLRYMDRM SGFTGADDLL DYMKSLHLPA NTFEGLENPP YQFIPGNDQP GDYRKPGVEF VPIEVCPPAG CQPVGDEPTR PLYYQDGTYY SYTGSEFVEA DPDFVKKVLD NKAYIDMPNA DYLTFFNPRR VYFGLRISF
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