| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1754 |
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| Symbol | |
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| ID | 8568406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 2042310 |
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| End bp | 2045030 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003291026 |
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| Protein GI | 268317307 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.255136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGCT CATCTAAACG GTTGTTTCAT CTGCCGGCCA AGCAGCGCCG ATGGGTGAGC
ATCTTGTTGG GCGGCTTCCT TGTGATGCTG CTCAACAGCC TGGTGCTCGT GCTGTTCGAC
CGCTCGACGG CGCTCGTCTA CATGAGCAAC GTGCTGCTGC ACGTCGGACT CGGCCTGCTG
CTGGTCGTGC CGCTCCTGCT GTTCCTGCTG GCGCATATCC GCACGATGCC GCTGCGCTGG
AATCTTCGGG CGACGGCCGC CGGCGTGTTC ACGGCGCTCT CCATGGGGGT GCTGCTCGTG
AGCGGCATCC TGCTTTTCTG GGGCACGCCG ACGCTGAACC GACGCGTGCT GCTGACGCTT
CACGTCGTGA GCATGTTTAC CTCACTGCTG GGCTTTCTCG TCCATGTGTC GCTCAAGCGA
GGGGTGCGCT TTCGCTTTCT GCTGCCCGAG GGCATTGCCG CCTTGCGCCG GGGACAGGTC
CTGCGCCATC CGCTGACGCT GACGTTCTGC GCGGGCGTGG TGGTCTCGGT TGCCTTCTTC
CTGGTGCCCT GGCTCAAACA GCCCGATCCG GTCTACCTCG ACACCGGCAA CGAAAATCCG
CTGGCTGCCT CCGAGGCCCT GCTGGCACAC GAGGGCTTTT TCAAGGAGGC CACGCTTTCC
GGCTCGAAAA CCTGCGGCCA GGCCGGCTGC CACCCCGACA TCTACGCGCA GTGGGAGGCT
TCGGCCCATC ATTTCTCTTC GTTCAACAAC CCGTACTACC GCCGCTCCAT CGAATACATG
CTGGAGCGCC GGCCGGTCGA GGCCGCCCGC TGGTGTGCCT CCTGCCACGA CCCGGTCATG
CTCTTTTCGG GACGCTTCGG CCACCGCATG CCGCTCGACA CCACACACTG GACGGCCCAC
GAGGGCATCA CCTGTCTTTC CTGTCATGCC GTTACGGGGC TACGCGACCT CCGGGGCAAC
GGCCGTTACG TGATCGCCGA ACCCGATGAA TATCCCTTTG CCCGAAGCAC GAATCCAATT
GGGCAGTGGC TGCACCGCCA GCTCATCCGG GCCAAGCCGG AGCCGCATCG GGAGGCCATG
CTTCGCCCCG TGCACCGTAC CGAGCAGTTC TGCAGCACCT GTCATAAAGT GGGGCTGCCG
CCCGCCGTCA ACTACTACCG CTGGCTCCGG GGCCAGAACG AATACGACGC CTGGCAGATG
AGTGGCGTAT CGGGCAACAC GGTGCGGTCG TTTTACCTGC CGGCCCAACC GCGCACCTGC
ATCGACTGCC ACATGCCCCT GGTGCCCTCC GACGATCAGG GCAACGACGG GGGCTTCGTG
CGCAGCCACC GCTTCCTGGC CGCCAACACG GCGCTGCCCT TCCTCAAAGG CCACGACGAG
CAGCTCCGGG CTACGCAGGC GTTTCTGCAG GACTCCATCG CCACGGTCGA TCTGTTTTTG
GTGCGCGTCA ACGGCCGCAC CTACGGCCCC GACGAACCCA TGCCCGTCCT CCGTCCCGGC
GATCGGGTGG AGCTGACCGT GGTCGTGCGC AACCGCAAGG TGGGTCATGC GCTGCCCGGC
GGTACGAACG ACTCGAACGA ACTCTGGCTG GAGGTGATCG GACGCGACCC CGAAGGGCAG
ACCGTGGTGG CCTCGGGCCT GCTGGATGAC GAAGGGCGGG TCGATTCCAC CGCGCACTTT
TTCGGGGCCG TGTTTGTGGA CCGGGCCGGC CAGGAGGCCA ACAAGCGCAA CCCGCACGAC
TTCCGCACCC CGGTTTACGT GAACGTGATC AATCCGGGCA CGGCGCGAAC GGTCCATTAC
CGCTTCACCG TGCCGCCCGG CCGTCCGATC ACCGAACTTT CGGTGGCCTT CAAGTACCGT
AAATTCAAGT GGTACTTCAA TAACTGGACG TTCCGGGGAC GTGTGGCACC CGGCCAGCCC
GATTCGCTCG CCACGCCCGA GGTGGACTAT CGCCGCTGGA TCCTGGATGA AGACCGCACG
GCGCCCGAGC TTCCGATCAC CACCATTGCC ACGGCGCGCC GCGTGGCCGG GCAACCACCC
GAAAGCAATG TGCCACTCTG GGAGCGCTGG AACGACTACG GCATCGGTCT TTTCCTGGAG
GGCAACACGC GTCGGGCGCT GGACGCCTTC GAACAGGTGA GCCGTCTGGC CCCGGACAAT
CCCGAAGGCC CCATCAACTT GGCCCGTGTG CTGATCGCCG AAGGGCAACT GGATCGGGCG
ATGGAGGCGC TCGCCGAAGC CGAACGGCGT CGGCCCGGCT ATCTGAAGAC CGCCTACTTC
CGGGGCAAGA TCTACCAGCG ACAGGGCGAA TACGATCGGG CGCTCGACGA GTGGATGAAG
GTAGTGGCCC GCTACCCGCG CGATCGCGTG CTGCTGCAGG AGATCGGGCG TATCCATTAC
CTTTCGGGCC GCTATGAAGA AGCGCTCCGG TGGTTCGACC GCATCCTGGC CATCGATCCG
GAGGACCTGG GCGGCCTCTA CAACCGCATG CTGGCCCTGG GGGCGCTGGG CCGCACCGAG
GAGTTCCGGG CGGCGAAAGC CCGCTACGAA TATCACAAGG TGGACGAGGA GGCTTCGGCC
TGGAGCACGC CGTATAAACA TCGTCATCCG ATGGCCAACC GTGAGGCGCA GCCCATCCAC
GAGCACGAGC TGCATCCCGT GGATGAAAAC GGACGGCTGC GCATAGCGCC GATGCTGGCC
TGGCAAAACA TTGATCGATA A
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| Protein sequence | MARSSKRLFH LPAKQRRWVS ILLGGFLVML LNSLVLVLFD RSTALVYMSN VLLHVGLGLL
LVVPLLLFLL AHIRTMPLRW NLRATAAGVF TALSMGVLLV SGILLFWGTP TLNRRVLLTL
HVVSMFTSLL GFLVHVSLKR GVRFRFLLPE GIAALRRGQV LRHPLTLTFC AGVVVSVAFF
LVPWLKQPDP VYLDTGNENP LAASEALLAH EGFFKEATLS GSKTCGQAGC HPDIYAQWEA
SAHHFSSFNN PYYRRSIEYM LERRPVEAAR WCASCHDPVM LFSGRFGHRM PLDTTHWTAH
EGITCLSCHA VTGLRDLRGN GRYVIAEPDE YPFARSTNPI GQWLHRQLIR AKPEPHREAM
LRPVHRTEQF CSTCHKVGLP PAVNYYRWLR GQNEYDAWQM SGVSGNTVRS FYLPAQPRTC
IDCHMPLVPS DDQGNDGGFV RSHRFLAANT ALPFLKGHDE QLRATQAFLQ DSIATVDLFL
VRVNGRTYGP DEPMPVLRPG DRVELTVVVR NRKVGHALPG GTNDSNELWL EVIGRDPEGQ
TVVASGLLDD EGRVDSTAHF FGAVFVDRAG QEANKRNPHD FRTPVYVNVI NPGTARTVHY
RFTVPPGRPI TELSVAFKYR KFKWYFNNWT FRGRVAPGQP DSLATPEVDY RRWILDEDRT
APELPITTIA TARRVAGQPP ESNVPLWERW NDYGIGLFLE GNTRRALDAF EQVSRLAPDN
PEGPINLARV LIAEGQLDRA MEALAEAERR RPGYLKTAYF RGKIYQRQGE YDRALDEWMK
VVARYPRDRV LLQEIGRIHY LSGRYEEALR WFDRILAIDP EDLGGLYNRM LALGALGRTE
EFRAAKARYE YHKVDEEASA WSTPYKHRHP MANREAQPIH EHELHPVDEN GRLRIAPMLA
WQNIDR
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