| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1746 |
|---|
| Symbol | |
|---|
| ID | 8568398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2027027 |
|---|
| End bp | 2028241 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_003291018 |
|---|
| Protein GI | 268317299 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGTT GTATGAGGCT GGTTTTCGGC CTGTTGCTGC TTACAGCTTG CCGGCAGAAT
CCGCCGGACT CGGCGCAACT ACCTCCGCAG GCCGAGCTCT TTCTCCGCCA GATGCAGCAG
GCGCTGGCAG CGCAGCGGCT GGCGCCCGCG CTGGCGCTGG CCGACAGTGT GGAGCGCTAC
GCCCCGGGCT GGCCGGACGC GCTGTTCGTC CGCGGCCTGG TTTACATGCA GCAGCGGCGT
CACGAAGCAG CCGCCGCTGC CTTTCGGCAG GTGCTCGAAC GGCAGCCCCA CTATCCGGGT
GCCTGGTTCA ACCTGGGGCA GAATGCGGCG CTGGCGCGTC GCTACCGCGA GGCCATCGGC
TACTACCGGA ATGAACTGAA GCTGGCCGAA GAGGTACCGA CGTCGCCGCA GACGCTGGCC
GCCGTATGGG CGCAGATGGG CAGCGCCTAT GAGCAACTGG CCCGGGACGA CAGCGCCCGC
GCGGCCTATG CGCAGGCGCT CCGACTGGAT TCGACCTATG CCGAAGCCCA TGCAGGGTTG
AGTCGACTGC TGGAACGTGC CGGCCGGTAT GAAGAGGCGC TCCGCCACGC AGAACAGGCA
ATGACACTGG CGCCCGCACG ACTGGACTAC CGCTATCGGG TAGGTGCGCT GCTGGTGCAG
TTGGGGCGCT TTGCAGAGGC AATCCCACTG CTGCAGACTG TGGTGCAACA CTGGCCCGGA
CACGACGGCG CCGCCTACAA CCTGGGACGC GCGTTGATCG CCACCGGCCG TACGGAAGCC
GGGCAGCGCT ACCTGGCGCG GGCCGACTCG CTGCAGCAGT TGACCGAGCG GTTGTTGCAC
GCCCGCCGAC GCACGGAACT GCAACCTGAC GACCCGGACG CCTGGTCGGC ATATGCCCGC
CTGCTGATGG AGGCCGGCTA TCTGGACCAG GCCTATACGG CCCTGCAGAC CGCCCTGACG
CTTGCCCCGG GCAACCTGGC GCTGCTCAGC AATCTGGCCA CGCTGCAACT GGCCATGGGG
GATACCACCG GTGCCCTGAA GGGATTGCAG CTGCTGGTCC GGGCCGACTC GAGCTTTGCC
GAGGGCTGGT TCAACCTGGG CGTCGTCTAT GCAATGCTCG GCGATACCGG GGCTGCCCGT
GAGGCCTGGC AGCGTACCCT GCGACTGAAT CCGGAGCATG AAGCAGCCCG TGCCTATCTC
AGCCGATTGC AATGA
|
|---|
| Protein sequence | MKCCMRLVFG LLLLTACRQN PPDSAQLPPQ AELFLRQMQQ ALAAQRLAPA LALADSVERY
APGWPDALFV RGLVYMQQRR HEAAAAAFRQ VLERQPHYPG AWFNLGQNAA LARRYREAIG
YYRNELKLAE EVPTSPQTLA AVWAQMGSAY EQLARDDSAR AAYAQALRLD STYAEAHAGL
SRLLERAGRY EEALRHAEQA MTLAPARLDY RYRVGALLVQ LGRFAEAIPL LQTVVQHWPG
HDGAAYNLGR ALIATGRTEA GQRYLARADS LQQLTERLLH ARRRTELQPD DPDAWSAYAR
LLMEAGYLDQ AYTALQTALT LAPGNLALLS NLATLQLAMG DTTGALKGLQ LLVRADSSFA
EGWFNLGVVY AMLGDTGAAR EAWQRTLRLN PEHEAARAYL SRLQ
|
|---|
| |