Gene Rmar_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1742 
Symbol 
ID8568394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2022382 
End bp2023107 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID 
Productprotein of unknown function DUF1080 
Protein accessionYP_003291014 
Protein GI268317295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGTA TGCGACGTCT TTTTTCAGTG GTTTTGCCGG GCATTGTACT GCTGGCATCC 
GGATGCGGGC CGTCGCGCTC GGAGGCGCCG GCGCAGGAGC AGACGACCGC GGCCGACACG 
TCCGACTGGA TCGTGCTGTT CGACGGCACG AGTCTGGAGG CCTGGCGCGG CTACCGGAGC 
GAGACGATTC CGCCCTGCTG GCGGATTGCC GAGGACGGGA CGCTGCACTG CATGGGCGAG 
GGGAGTGGCG ATCTGATCAC GAAGGAGCAG TTTGCCGACT TTGTGCTGGA GCTGGAATGG 
AAGGTGGCGC CCGGCGGCAA CAGCGGGATC ATGTACCGGG TGACGGAGGA ATACGACGCG 
CCGTGGATGA GCGGGCCGGA GTACCAGGTG CTGGACAATG CGGGGCATCC GGACGGCAAC 
GATCCGAAGA CGAGCGCCGG GGCCTGCTAC GCGCTGTATC CGACGGATCC GTCGGCGGTG 
CGTCCGGCCG GAGAATGGAA CACGACGCGG ATCGTGGTGG ACAGCGCGCA CGTCGAGCAC 
TGGCTCAACG GCCGCAAGGT GGTTGAGTAC GAACTCTGGA GCGAAGACTG GAACGCCCGC 
GTGGCGGCCA GCAAATTCCG GGTCTACCCG AACTTCGGCA GAGCGCGGCG GGGCCACCTT 
GTGCTACAGC ATCATGGCGA TCCGGTCTGG TATCGCAACA TCCGCATTCG TTTGCTGAAT 
CGATAA
 
Protein sequence
MNRMRRLFSV VLPGIVLLAS GCGPSRSEAP AQEQTTAADT SDWIVLFDGT SLEAWRGYRS 
ETIPPCWRIA EDGTLHCMGE GSGDLITKEQ FADFVLELEW KVAPGGNSGI MYRVTEEYDA 
PWMSGPEYQV LDNAGHPDGN DPKTSAGACY ALYPTDPSAV RPAGEWNTTR IVVDSAHVEH 
WLNGRKVVEY ELWSEDWNAR VAASKFRVYP NFGRARRGHL VLQHHGDPVW YRNIRIRLLN 
R