Gene Rmar_1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1735 
Symbol 
ID8568387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2012974 
End bp2013834 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content64% 
IMG OID 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_003291007 
Protein GI268317288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.340783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGCC GCGATTTTCT GCGCACGGCT GGTGGGCTGG CGCTGGGAGG GCTGACGGTG 
GCGCTGGGCT GCCGTCCATC CGAAAGCCAG TCTTCACAGA GCCAGAACGC CTCGGGTGGC
ATGCGCCGCC TGGAACGCAT CGGGCTGCAG CTCTACACGG TGCGGACGCT CATGGAGCAG
GACGTGCCGC GTACGCTGGA GCAGGTAGCC GAGATCGGCT ATCGCGAGGT GGAATTTGCG
GGTTACTACA ACTACACGCC ACAGGAGCTG CACCAGATGC TCGAAAACCT GGGACTTTCG
GCTCCCGCCA CGCATGTGCC CTACCAGGCG CTCGAAGAAA ATCTGGAGGC TACGCTGGAG
GCTGCGCAGG TGCTGGGGCA TCGCTATGTG GTGGTGCCCT GGCTGCCGCC CGAGCAGCGT
CAGACGCTCG ACGACTACCG GCGCTGGGCC GAGCACTTCA ACCGCTGGGG GGAGGCCTGC
AGGGCTGCAG GCGTGCAGTT CGCCTACCAC AACCACGATT TCGAGTTTGC CCGCCTCGAC
GATCAGGTGC CCTACGACGT GCTGCTGGCC GAGACGGATC CGGAGCTGGT CAAGATGGAG
CTGGACCTGT ACTGGATCAC CTACGCCGGG CACGATCCGC TGGCCTACCT GCAGCAGCAC
CCCGAACGCT TTCCGCTCTG CCACGTCAAG GACATGACGG CCGAGCGGCA GATGACGGAC
GTAGGGCAGG GGACCATCGA CTTCGCGAAG ATCTTTGCGC AGGCGCAGTT CCAGCACTAT
TTTGTGGAAC ACGACCAACC CGAGGATCCG CTGGCCAGCA TCCGGCGCAG CTACGAGTAC
CTGTCGCAAC TGACCTTCTA A
 
Protein sequence
MDRRDFLRTA GGLALGGLTV ALGCRPSESQ SSQSQNASGG MRRLERIGLQ LYTVRTLMEQ 
DVPRTLEQVA EIGYREVEFA GYYNYTPQEL HQMLENLGLS APATHVPYQA LEENLEATLE
AAQVLGHRYV VVPWLPPEQR QTLDDYRRWA EHFNRWGEAC RAAGVQFAYH NHDFEFARLD
DQVPYDVLLA ETDPELVKME LDLYWITYAG HDPLAYLQQH PERFPLCHVK DMTAERQMTD
VGQGTIDFAK IFAQAQFQHY FVEHDQPEDP LASIRRSYEY LSQLTF