Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1735 |
Symbol | |
ID | 8568387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2012974 |
End bp | 2013834 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003291007 |
Protein GI | 268317288 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.340783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGCC GCGATTTTCT GCGCACGGCT GGTGGGCTGG CGCTGGGAGG GCTGACGGTG GCGCTGGGCT GCCGTCCATC CGAAAGCCAG TCTTCACAGA GCCAGAACGC CTCGGGTGGC ATGCGCCGCC TGGAACGCAT CGGGCTGCAG CTCTACACGG TGCGGACGCT CATGGAGCAG GACGTGCCGC GTACGCTGGA GCAGGTAGCC GAGATCGGCT ATCGCGAGGT GGAATTTGCG GGTTACTACA ACTACACGCC ACAGGAGCTG CACCAGATGC TCGAAAACCT GGGACTTTCG GCTCCCGCCA CGCATGTGCC CTACCAGGCG CTCGAAGAAA ATCTGGAGGC TACGCTGGAG GCTGCGCAGG TGCTGGGGCA TCGCTATGTG GTGGTGCCCT GGCTGCCGCC CGAGCAGCGT CAGACGCTCG ACGACTACCG GCGCTGGGCC GAGCACTTCA ACCGCTGGGG GGAGGCCTGC AGGGCTGCAG GCGTGCAGTT CGCCTACCAC AACCACGATT TCGAGTTTGC CCGCCTCGAC GATCAGGTGC CCTACGACGT GCTGCTGGCC GAGACGGATC CGGAGCTGGT CAAGATGGAG CTGGACCTGT ACTGGATCAC CTACGCCGGG CACGATCCGC TGGCCTACCT GCAGCAGCAC CCCGAACGCT TTCCGCTCTG CCACGTCAAG GACATGACGG CCGAGCGGCA GATGACGGAC GTAGGGCAGG GGACCATCGA CTTCGCGAAG ATCTTTGCGC AGGCGCAGTT CCAGCACTAT TTTGTGGAAC ACGACCAACC CGAGGATCCG CTGGCCAGCA TCCGGCGCAG CTACGAGTAC CTGTCGCAAC TGACCTTCTA A
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Protein sequence | MDRRDFLRTA GGLALGGLTV ALGCRPSESQ SSQSQNASGG MRRLERIGLQ LYTVRTLMEQ DVPRTLEQVA EIGYREVEFA GYYNYTPQEL HQMLENLGLS APATHVPYQA LEENLEATLE AAQVLGHRYV VVPWLPPEQR QTLDDYRRWA EHFNRWGEAC RAAGVQFAYH NHDFEFARLD DQVPYDVLLA ETDPELVKME LDLYWITYAG HDPLAYLQQH PERFPLCHVK DMTAERQMTD VGQGTIDFAK IFAQAQFQHY FVEHDQPEDP LASIRRSYEY LSQLTF
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