Gene Rmar_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1733 
Symbol 
ID8568385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2010745 
End bp2011764 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_003291005 
Protein GI268317286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAC CGGTTACCCT GTTTACCGGA CAGTGGGCGG ACCTGCCGCT GGAGACGCTC 
GCCAAGAAAG CGGCCGAATG GGGCTACGAT GGCCTGGAGC TGGCCTGCTG GGGCGATCAC
TTCGACGTGC AGCGTGCGCT CAAAGAGGAC GGCTACTGCG AGGAGCGGCT GGAGTTGCTG
GCCCGCTACG GGCTGAAAGT CTGGGCTATC AGTAACCACC TGGTGGGCCA GGCCGTCTGC
GACAACATCG ACGAGCGCCA CAAGTCGATC CTGCCGCCGC ACGTATGGGG CGACGGCGAC
CCTGAAGGCG TGCGCCAGCG GGCAGCCCGG GAGATGATGG ACACCGCCCG GGCGGCCGCC
AAACTGGGGG TTAAGGTGGT CAACGGCTTT ACGGGGAGCA GCATCTGGCA TCTGCTCTAC
GCCTTCCCGC CGCTGCTGCC CGGCATGATC GAGAAGGGCT ACGAGGATTT TGCCCGCCGC
TGGAATCCGA TCCTGGATGT GTTCGAGGAG GTAGGCGTGC GCTTCGCGCT CGAAGTGCAC
CCGACCGAGA TCGCCTTCGA CATTTCGTCG GCCGAGCGGG CGCTGGAGGC CATCGGCTAT
CGCGAATCGT TCGGCTTCAA CTACGATCCA AGCCATCTGG GCTACCAGGG CGTCGACTAC
GTGGCGTTCA TCGAGCGCTT TGCGGACCGC ATCTACCACG TGCACATGAA GGACGTCTGG
TGGTCGCCCG TGCCGAAGCG TTCCGGCGTT TTTGGCGGGC ACCTCGAGTT CGGACACCGC
GACCGCTACT GGGACTTCCG CTCGATCGGC CGCGGCAACA TCCGCTTCGA GGAGATCATC
CGGGCACTGA ACCGGATTGG CTACGACGGC CCGCTTTCGA TCGAGTGGGA AGACATCGGC
ATGGACCGCG AGCACGGCGC CCGCGAAGCC TGTGCCCGCG TCAAAGCGAT GGACTTCCCA
CCGTCGGCGG CCGCGTTTGA CGCGGCCTTC GCCCGCGAAC GCCAGGCCCA GGCGACCTGA
 
Protein sequence
MARPVTLFTG QWADLPLETL AKKAAEWGYD GLELACWGDH FDVQRALKED GYCEERLELL 
ARYGLKVWAI SNHLVGQAVC DNIDERHKSI LPPHVWGDGD PEGVRQRAAR EMMDTARAAA
KLGVKVVNGF TGSSIWHLLY AFPPLLPGMI EKGYEDFARR WNPILDVFEE VGVRFALEVH
PTEIAFDISS AERALEAIGY RESFGFNYDP SHLGYQGVDY VAFIERFADR IYHVHMKDVW
WSPVPKRSGV FGGHLEFGHR DRYWDFRSIG RGNIRFEEII RALNRIGYDG PLSIEWEDIG
MDREHGAREA CARVKAMDFP PSAAAFDAAF ARERQAQAT