Gene Rmar_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1719 
Symbol 
ID8568371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1994785 
End bp1995339 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content57% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003290992 
Protein GI268317273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00014535 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGC TGCTGAAAAA GAAAAAGCGC CAGGAGGCCG AAATTCCCAC GGCTTCGATG 
GCCGACATCG CGTTCCTGCT GCTGATCTTC TTCCTGGTGA CCACGACGAT CGACGTGGAT 
ACGGGGATCG GCATGACGCT GCCGCCCAAG CTGGAAGAAG ATCAGGAACC GCCGCCGGTG 
CGGGAACGCA ACATGCTCAA AATCCTGGTC AATGCCCAGG GCCAGGTGCT GATCGAAGAT 
CAGGTGGCTT CGATTCAGCA GATCCGCGAA GAGGTCAAAA AGCACATTAC CAACAACGGC 
GCGGATCCCA ATTACGCCGA AAGTCCGCAG AAGGCCGTCG TGTCGATCAA GACGGACTGC 
GAGACTTCTT ACAATACGTA TATCCAGGTG CTCGACGAGG TCTGGATGGC CTACTTCGAG 
CTCTGGGACG CCGAGGCGCG GAAACTGGGC TATCCCAACT ACAACGCCTA CCGGGCCACG 
CTGGGACCGG ATGACGAAAA TCAGATTCGT GAAATCATTC CGGCCCAGAT TTCGGTGGCA 
GAGCCTGATT GCTAA
 
Protein sequence
MAGLLKKKKR QEAEIPTASM ADIAFLLLIF FLVTTTIDVD TGIGMTLPPK LEEDQEPPPV 
RERNMLKILV NAQGQVLIED QVASIQQIRE EVKKHITNNG ADPNYAESPQ KAVVSIKTDC 
ETSYNTYIQV LDEVWMAYFE LWDAEARKLG YPNYNAYRAT LGPDDENQIR EIIPAQISVA 
EPDC