Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1712 |
Symbol | |
ID | 8568364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1986805 |
End bp | 1987467 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_003290986 |
Protein GI | 268317267 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0573115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGA AACCGATCGG CCGACTGCAT GTGCTCACGG ACTTTTACTT TCAGCAGCGG TATGGTCATG CCGAGCTGGC CCGCCTGGTG ATCGCCGGCG GGGCCGACAC CGTGCAGTTT CGCCAGAAGT TCGGCGGTAT CCGCCACAAA CTCTACGAGG CCCGGCGCAC GGCCGCCGTG TGTAAGGAGG CCGGCGTGCC GCTGATCATC GACGATCACA TCGACATCGC GCTGGCCGTG GAAGCTGACG GCGTCCACCT CGGACAGGAG GATTTTCCCG TCGCCGAAGC CCGGCGCATC CTGGGACCCG ACTTCATCAT CGGCGCCACG GCCACCACCG TCGAGCAGGC AGTGGAAGCC TGGCGGGCCG GCGCCGACTA CATCGGCTTC GGTCCGGTTT TTCCCACTTC GTCGAAAGCC AACCCGGCTT CGGTGAAGGG CATCGAAGGA CTGCGTCAGG TCTGCGAGGC CGTCCCCATC CCTGTGATTG CCATCGCTGG CATCACCGTG CAGCGGGTGC GCCCGGTGCT GGAGGCCGGC GCCTACGGGG TGGCCGTGAT GACCGCCATC ACGACCGCGC CAGATCCGCG GGCGGCCACC GCCCAGTTTC GCCTGGAGAT CGAATCGGTG CTGCGGGCAC TCCCGGAAAC GCCCCGAACA TGA
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Protein sequence | MGKKPIGRLH VLTDFYFQQR YGHAELARLV IAGGADTVQF RQKFGGIRHK LYEARRTAAV CKEAGVPLII DDHIDIALAV EADGVHLGQE DFPVAEARRI LGPDFIIGAT ATTVEQAVEA WRAGADYIGF GPVFPTSSKA NPASVKGIEG LRQVCEAVPI PVIAIAGITV QRVRPVLEAG AYGVAVMTAI TTAPDPRAAT AQFRLEIESV LRALPETPRT
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