Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1708 |
Symbol | |
ID | 8568360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1981245 |
End bp | 1983137 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003290982 |
Protein GI | 268317263 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.179311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAAC GCATCTACAC GGCGCCACCC GATACGGGCA CGCCGGTGCT CGGTAAGACG CTGCCGGACG TGCTCTACGA GGCGCTGGCG CGCTACGAGA ACCCGGCCTT CCTGAATCAA CCGGCCGGAC CGGGGCGCTG GACGCCCATC TCGCTGCGCG ATTTTGCCGA GCAGGCCGAA GCGCTGGCGC TGGGCCTGCA TGCGATGGGA CTGGAGCGGG GCGCCCACGT GGCCTTCTAC ATGGAAAGCG ACGCCCACTT CTGCCTGGCC GACATGGCCT GCCTGATCGG TGGCCTGATC GACGTGCCCA TCTACCTGAC GCACGCGCCC GAGTCGATTC ATTACGTCAT CGAGCATGCC GAGGCCCGGG CGCTCGTCGT CTCGAACCGA GCATTGCTCG AACGCGTCGC GCCGCTGCTG CGCGACCTGC CCGGCGTGCA GTTCGTCGTG GTGGCCGACG CGACCGGGCT GGACACGGAT CGGGTGGAAG GGCGGCCGCT CTACACCTTC GCCCAGTTGC TGGAAGCAGG GCGGCAGCGC CGGGCGGCCG ATCCGGAGGC CATCGCGCGG CTGCGGGCGC AGATCCGTCC GGGCGACCTG GCCACCATCA TCTACACGAG CGGCACGACG GGGCGTCCCA AGGGCGTGAT GCTCTCCCAC GAGAACATTT CGTTCAACGC GCTCACGTCC TTCAGCGGGA TCAAGCAGTA CCGGCCGGGG CCGGACGGCG AGGTGGCCCT GTCGTTTCTG CCGCTGACGC ACGTTTTCGC CCGGACGCTC TTCTACGGCT ACCTGTACTA TGCCACCAGC GTCTATTTCA CGACGCCCGA CGCCCTGCGT GACGCGCTCC GGCAGGTGCG GCCCACGACG TTCGCCACGG TGCCGCGCGT GCTCGAGAAG ATCTACGGGG CGCTGGTGGA GCGGGCGGCC GCCATGCCCG GCCTGAAGGG GCGGATCTTT CGCTGGGCGC TGGACCTGGC CCGGCGCTAC GAGCTGGGGC GCGAGCCGCG GGGACTTTAC CGGCTGCAAC TGGCCGTGGC CGACCGGCTG GTCTATCGCA AATGGCGGGA GGCCATGGGC GGGCGCATCG CCTTCATCAT TGCGGGCGGG GCGGCCCTTT CGGCCGAACT GGCCAACATC TTCGCGGCGG CTGGCATCCC GATCCTGCAG GGCTACGGCC TGACCGAGAC GAGCCCGGTC ATCACCTACA ACCGCCCCGA GCTGAACCGG GCCGGCACGG TGGGGGTGCC CATCCCGGGC GTGGAGGTGA AGATCGCCGA GGACGGCGAG ATTCTCACGC GCGGCCCCCA CGTCATGCTG GGCTATTACA AAGACCCGGA GCGCACACGC GAGGTGATCG ACGAAGAAGG GTGGTTCCAC ACGGGCGACA TCGGCTACTT CACTGAAGAG GGCTTTCTCG TTATCACCGA CCGCAAGAAA GATCTGTTCA AGCTCTCGAC GGGCAAGTAT GTGATGCCCC AGCCGCTGGA GCAGCGCCTG ACGGCCGATC CGCTTGTCGA GCAGGCGCTC GTGGTGGGAC CCGGTTACAA GTTCACGGCG GCGCTCATTT TCCCGGATGA GGAAGCGCTT CGACGGCTGG CGCGGCGGCT CGGGCTCGAC GCCAACCAGC CGCTCGAAAA GCTGGTACGC GAGCCGAAGA TCCTGGAGGT CTATCAGCAG ATCGTCGATC GCGCCAACGA GGGGATGGAC CCCTGGGCCA CGATCAAGCG CTTTGTGCTG GTGCCCGAGC GGCTTTCCAT CGAAGAAGGC ACGCTGACGC CCACGCTCAA AGTGCGGCGC TCGGCGCTCT ACAAAAAGTA CGAGGCCCAG ATTCGGGCGC TCTACGAGGG TGCCGAGGCC GAAGCACAGG AAGCGACAAC TCCTGAATCC TGA
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Protein sequence | MGERIYTAPP DTGTPVLGKT LPDVLYEALA RYENPAFLNQ PAGPGRWTPI SLRDFAEQAE ALALGLHAMG LERGAHVAFY MESDAHFCLA DMACLIGGLI DVPIYLTHAP ESIHYVIEHA EARALVVSNR ALLERVAPLL RDLPGVQFVV VADATGLDTD RVEGRPLYTF AQLLEAGRQR RAADPEAIAR LRAQIRPGDL ATIIYTSGTT GRPKGVMLSH ENISFNALTS FSGIKQYRPG PDGEVALSFL PLTHVFARTL FYGYLYYATS VYFTTPDALR DALRQVRPTT FATVPRVLEK IYGALVERAA AMPGLKGRIF RWALDLARRY ELGREPRGLY RLQLAVADRL VYRKWREAMG GRIAFIIAGG AALSAELANI FAAAGIPILQ GYGLTETSPV ITYNRPELNR AGTVGVPIPG VEVKIAEDGE ILTRGPHVML GYYKDPERTR EVIDEEGWFH TGDIGYFTEE GFLVITDRKK DLFKLSTGKY VMPQPLEQRL TADPLVEQAL VVGPGYKFTA ALIFPDEEAL RRLARRLGLD ANQPLEKLVR EPKILEVYQQ IVDRANEGMD PWATIKRFVL VPERLSIEEG TLTPTLKVRR SALYKKYEAQ IRALYEGAEA EAQEATTPES
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