| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1675 |
|---|
| Symbol | |
|---|
| ID | 8568327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1938539 |
|---|
| End bp | 1939861 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003290949 |
|---|
| Protein GI | 268317230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.160013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCGC TGGTGGTCGA CAAAGCCACG CTGCTGGAGC GGATTCGGAC GAAGGAGGCG
GTGGTGGGCG TGGTGGGGCT GGGCTACGTG GGCTTGCCCT TTGCCGTGGA GAAGGCCAAG
GTGGGCTACC GCGTCATCGG CATCGAGCAG AATCCCCGCC GGGCCGAGAA GATTAACCGC
GGGGAGAACT ACATCCGGGA CGTGCGCGAC GAGGAGCTGC GACATCTGGT GGCCGAAGGC
CGGATCGTGG CCGAGACCGA CTTCAATCGC GTGCCGGAGA TGGACGTAGT GGTCATCTGC
GTGCCCACGC CGCTGACGAA AAACCTGACG CCGGATTTGC AGTACGTCGA GCGCGTCACG
CACGAGATCG GGCGGCGGCT GCGTCCGGGC CAGCTCATCA GTCTGGAGTC GACGACCTAT
CCGGGCACGA CCGAGGAGGT GATGCTTCCG ATTCTGGAGG GCGAGAGCGG GTTGAAGGTC
GAGCGGGACT TTTTCCTGGC GCACTCGCCT GAGCGGGTCG ATCCGGGCAA CCAGCGTTAC
ACGACGAAGA ACACCTCGAA GGTGGTGGGC GGCGTGGGGC CGGAGAGCCT GGAAGTGGCC
GTGGCCTTTT ACAGCCAGAC GATCGAGCAC GTGGTGCCGG TTTCGAGCGC GAAGGCGGCC
GAGCTGGTGA AGGTGTTCGA GAACACGTTC CGGGCGGTGA ACATCGCGCT GGTCAACGAG
CTGGCGCTGT TGTGTGACCG GATGGGCTTG AACGTGTGGG AGGTGCTGGA GGCGGCCTTT
ACGAAGCCGT TTGGGATCAT GCCGTTCTGG CCGGGTCCGG GCGTGGGCGG CCACTGCATC
CCGGTCGATC CGCACTATCT GGAGTGGAAG GCCAAGGAGC TGAACTTCAA CACGCATTTC
ATTGCGCTGG CGGGGGAGAT CAACCGGAAG ATGCCGGAGT TTGTGCGGGA GAAGGCCTAC
CGGGTGTTGA ACCGGCTGGG GGTGGCGCCG TCGCGGGCGC GCGTGCTGCT GCTGGGGGTG
GCCTACAAGC GGGACCTGGA GGACTGGCGG GAGAGTCCGG CGCTGGAGGT GCTGCGACTG
CTGGAGGCCG ACGGGGTGGC GGTGCGCTAC CACGATCCGT ACGTGCCGGA AGTGCAGGTG
GCGGGGCGGA CCTACCGGAG CGTGCCGCTT ACGCAGGAGG CGGTTGCGGG GGCGGATCTG
GTGATCATCA CGACGGACCA CAGCACGATC GACTACCGGT GGGTGGTCGA GCAGGCGCGC
GCGGTGCTGG ACACGCGCTA CGCGACGCGT GGCATTGAAA GCGAAAAGAT TGTGCTGCTA
TGA
|
|---|
| Protein sequence | MESLVVDKAT LLERIRTKEA VVGVVGLGYV GLPFAVEKAK VGYRVIGIEQ NPRRAEKINR
GENYIRDVRD EELRHLVAEG RIVAETDFNR VPEMDVVVIC VPTPLTKNLT PDLQYVERVT
HEIGRRLRPG QLISLESTTY PGTTEEVMLP ILEGESGLKV ERDFFLAHSP ERVDPGNQRY
TTKNTSKVVG GVGPESLEVA VAFYSQTIEH VVPVSSAKAA ELVKVFENTF RAVNIALVNE
LALLCDRMGL NVWEVLEAAF TKPFGIMPFW PGPGVGGHCI PVDPHYLEWK AKELNFNTHF
IALAGEINRK MPEFVREKAY RVLNRLGVAP SRARVLLLGV AYKRDLEDWR ESPALEVLRL
LEADGVAVRY HDPYVPEVQV AGRTYRSVPL TQEAVAGADL VIITTDHSTI DYRWVVEQAR
AVLDTRYATR GIESEKIVLL
|
|---|
| |