| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1661 |
|---|
| Symbol | |
|---|
| ID | 8568313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1924220 |
|---|
| End bp | 1927036 |
|---|
| Gene Length | 2817 bp |
|---|
| Protein Length | 938 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_003290935 |
|---|
| Protein GI | 268317216 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGC TTCCCCCTTT GCAGATCGAA ATCGAAGGCA CCGGCATTTC CCGACCGCTC
AGCGAACACG TGAACCTGCT TGGCGGCCTG CTGGGACAGG TCATTCAGGA AATGGCCGGT
CCCGAAATGC TGGAGCTGGT CGAGACGCTG CGGCGCCTGT GCAAGCAGGC GGCCCAAGAA
AACCGTCCCG AGCTCCGGGA GCAGGCCTAC ACGCGCATCC ACAGCGCCAC CTACGACGAG
CTGCTCTGGC TGCTGCGCGC CTACACGGCC TTTTTCCACC TGGTCAACCA GGCCGAGCAA
CAGGAGATCA TCCGGATCAA CCGGGAACGG GCACAGCAGA GTACGCCCGA ACACCCGCGT
CCGGAGTCGA TCGACGAGGC CATCCTGGCC CTCAAGCAGC AGGGCCGGAC GCTCGACGAC
GTGCTGGCGC TGCTGGAGCG GCTGGACATT CAGCCCACGC TGACCGCCCA TCCCACCGAA
GCACGCCGCC GCAGCATCCT CTACAAGCAG CAGCACATCG CCCGGCTGCT TTCGCAGCAA
CGCCGCTGCC GGCTCACGCC CGAGGAGCAG GAAGCCCTGC TGGTGGACCT GCACAACCAG
ATCACGCTGC TGCTGGGCAC GGCCGAGGTG CGCGAGGAAC GCCCCACCGT TCGCGACGAA
GTCGAACAGG GCCTGTACTT TATCCAGAGT ACGATCTGGG AGGCAGTGCC CCGCATTCAT
GAAGACGTGC GCCGGGCGCT GCGCCGCTAC TACGGCACCG ACGCCGACTT CCGGCCGTTT
CTGCGCTACC GCTCCTGGAT CGGGAGCGAC CGCGACGGCA ACCCTTACGT CACGCCGGAA
ATCACGCGCT GGACGGCCCT GACGCAGCGA CGGCTGGTGC TCCAGCGCTA CATGGAGGAG
CTGCGCCAGC TCCGACGCCG GCTGAGTCTT TCGGATCGCT ACGTGCCGCC CCCGGAGGAG
CTGCGCCGCT CGCTGGCCCG CGACGCCCGG GAGGTGTCGC TCCCGCCCCA CGTGCTTCGC
CAGTTCCGAC ACGAGTCGTT CCGGCTGAAG ATCTCCTACA TCATGGGGCG GCTGCACGGG
CTGCTCCAGG CGCTGGACGA TCCGACGCAG CCTGCGCCCG ACTACGACGC CGATGCCTTC
GTCGAAGACC TGCGGCTGCT GCAGCGCTGC CTGGAAGCCT GCGGTCTGGA GCGCATTGCG
CGTCACGATC AGCTCTCCCG CCTGCTGGTG CTGGTCCAGA CGTTCGGCTT TCATCTGGTC
ACGCTCGACG TGCGCCAGCA CAGCAGCGTG CATGAAGCCG CCGTGGCCGA GCTGCTCAGG
CTGGCCGGGG TCGAGAACGA CTACCGGGCC CTGCCCGAGT CGCGCCGCCA GGAGCTGCTG
GCCGAGGAGC TGAGCAATCC GCGGCCGCTG CTGCCGCCGG GGGCCCGGGT GTCGGAAGCC
ACGCGGCAGG TGCTGGAGAC CTTCGCGGCC ATCCGCGAGC TGGTGCAGCT CGACCCTCGC
CTCGTGGGCA GCTACATCGT GAGCATGACG CACACCGTCA GCGACCTGCT CGAGCCCATG
CTGCTGGCCA AAGAAGTCGG GCTCTGGCAC TACGAGCGCG ACCCCCGCAC CGGCAAGCCG
GGCCACGTGC GCTGCCCCAT CGATTTTGTG CCGCTTTTCG AGACGATCGA AGACCTGGAG
GCGGCGGCCA GCCGCATGGA AGCCATCCTG AGCCATCCCG TCTACCGGAT GCAGGTGGCT
GCCCGCGGCG GCTTTCAGGA AATCATGCTG GGCTACTCCG ACAGCACGAA AGACGGTGGC
TACTGGATGG CCAACTGGGC GCTGCATCGG GCCCAGGAGC AGCTGGCCGA AGTATGTCTT
CGCCATGGCG TGGACTTCCG GCTGTTTCAC GGGCGCGGCG GTACTGTGGG ACGTGGGGGC
GGCCGCGCCA ACCAGGCCAT CCTGGCCATG CCGCCGGTGG TCCATAACGG CCGCATTCGC
TTCACCGAGC AGGGCGAGGT GATCTCGTTC CGCTATGCCC TGCCCGAGAT CGCCCATCGC
CACCTGGAGC AGATCGTCAA TGCCATGCTC CGCGTGGTCG GCCTCCCGGC CGCTTCCGGC
ACCGATGGCA CCGATCCGGC CACGCGCAAC CGCCTGATGG ACGAGCTGGC CACGCGCTCC
ATGCGGGCTT ACCGGCGCCT GATCGATGCG CCTGACTTCT GGTCGTGGTA CACGCGCATC
ACTCCGATCG ACCAGATCAG CCGCCTGCCC ATCGCCTCGC GGCCGGTCTC GCGCAGCAGC
GCCCGTGAGG TCGACTTCGA AAGCCTGCGG GCCATCCCCT GGGTCTTCGC CTGGACCCAG
GTCCGCTACC TGATTCCGGG CTGGTTCGGG ATCGGCCAGG CCCTCGACGA GTTGCTCCAG
ACGTCGCCCG AGCATCTGGA GACGCTTCGC ACCTGGTATC GATCCTGGCC GTTTTTCCGC
ACCGTGCTGC AGAACGCCCA GCGCGAGATG GTGCGCGCCC GCCTGGAAAT TGCCGCCTAC
TATGACCGGC TACTGGGCGA CGGCCCGACG GCATTCCATC AGATGATCGA GGAAGACTAT
CATCGAGCCC GGACGGCCAT CCTGCGCATC ACCGATCAGG AGGAGTTGCT CGACCACGAT
CCGATCATCC GCAAATCCGT GCAGCTCCGC AACCCGTACA CCGATGTGCT GAACCTGGTG
CAGCTCGAGC TGATGCGGCG CTATCGCCAG GCGCCCGAGG CCGATCGGGA GCCGCTCCGG
CGCGCTCTGT TCCTGAGCAT CAACGGGATC GCCGCCGCCA TGCAGAGCAC CGGATAG
|
|---|
| Protein sequence | MSVLPPLQIE IEGTGISRPL SEHVNLLGGL LGQVIQEMAG PEMLELVETL RRLCKQAAQE
NRPELREQAY TRIHSATYDE LLWLLRAYTA FFHLVNQAEQ QEIIRINRER AQQSTPEHPR
PESIDEAILA LKQQGRTLDD VLALLERLDI QPTLTAHPTE ARRRSILYKQ QHIARLLSQQ
RRCRLTPEEQ EALLVDLHNQ ITLLLGTAEV REERPTVRDE VEQGLYFIQS TIWEAVPRIH
EDVRRALRRY YGTDADFRPF LRYRSWIGSD RDGNPYVTPE ITRWTALTQR RLVLQRYMEE
LRQLRRRLSL SDRYVPPPEE LRRSLARDAR EVSLPPHVLR QFRHESFRLK ISYIMGRLHG
LLQALDDPTQ PAPDYDADAF VEDLRLLQRC LEACGLERIA RHDQLSRLLV LVQTFGFHLV
TLDVRQHSSV HEAAVAELLR LAGVENDYRA LPESRRQELL AEELSNPRPL LPPGARVSEA
TRQVLETFAA IRELVQLDPR LVGSYIVSMT HTVSDLLEPM LLAKEVGLWH YERDPRTGKP
GHVRCPIDFV PLFETIEDLE AAASRMEAIL SHPVYRMQVA ARGGFQEIML GYSDSTKDGG
YWMANWALHR AQEQLAEVCL RHGVDFRLFH GRGGTVGRGG GRANQAILAM PPVVHNGRIR
FTEQGEVISF RYALPEIAHR HLEQIVNAML RVVGLPAASG TDGTDPATRN RLMDELATRS
MRAYRRLIDA PDFWSWYTRI TPIDQISRLP IASRPVSRSS AREVDFESLR AIPWVFAWTQ
VRYLIPGWFG IGQALDELLQ TSPEHLETLR TWYRSWPFFR TVLQNAQREM VRARLEIAAY
YDRLLGDGPT AFHQMIEEDY HRARTAILRI TDQEELLDHD PIIRKSVQLR NPYTDVLNLV
QLELMRRYRQ APEADREPLR RALFLSINGI AAAMQSTG
|
|---|
| |