| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1660 |
|---|
| Symbol | |
|---|
| ID | 8568312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1923372 |
|---|
| End bp | 1924223 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | 2,3,4,5-tetrahydropyridine-2, 6-dicarboxylate-N-succinyltransferase |
|---|
| Protein accession | YP_003290934 |
|---|
| Protein GI | 268317215 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCG ACGTCCACGA AAAGCTTCGC CAGCGGATCG AAGTGCTGGC CGCGCAGCCG
ACCGAGACGC TGGACCTGCG TGCCGCCCGC GAAGCGTTCG AAGAACTGAT CGACGGCCTG
AACCGGGGCA CGATCCGGGC GGCCACGCCC ACCGAAGACG GCCGCTGGAT CACCCATGCC
TGGGTCAAGC AGGGCATCCT GCTGGGCTTT CGGATCGGGC AACTGGTCGA TTACTCGACG
GAGCGGTTTC CCTTCTTCGA CAAGGACACC TACCCGCTCA AGCCACTTAC GCTGGCCGAT
CGGGTGCGCA TCGTACCCGG CGGCTCGTCG ATCCGCACGG GCGCCTACCT GGCGCCGGGC
GTGGTCTGCA TGCCGCCCAT GTACGTGAAC GTCGGCGCCT ATGTGGACGA AGGGACGATG
ATCGACTCGC ACGCGCTGGT CGGAAGCTGT GCACAGATCG GAAAGCGCGT GCACCTGTCG
GCCGCCGCGC AGATCGGCGG GGTGCTCGAA CCGGTGGGCG CCCGGCCCGT GATCATCGAA
GACGACGTGT TCGTGGGCGG TGGCTGCGGC ATCTACGAAG GCTGCCTGGT CCGGAAAGGG
GCCGTGCTGG CGCCTGGCGT GATCCTGACC GGCTCGACGA AGCTCTACGA CCTGGTGCAC
GAGCGCATCC TGGCCCCGGC ACCCGGCGAG CCGCTGGAGG TGCCGCCCTA CGCCGTGGTC
GTACCCGGCG CCCGCGCCGT GCGCTCGGCC TTTGGCGAGG CGCACGGCCT CTCGCTCTAC
ACCCCGGTCA TCGTCAAATA CCGCGACGCC CGTACCAACG CTGCCACTGC ACTCGAAGAG
AGCCTGCGAT GA
|
|---|
| Protein sequence | MLTDVHEKLR QRIEVLAAQP TETLDLRAAR EAFEELIDGL NRGTIRAATP TEDGRWITHA
WVKQGILLGF RIGQLVDYST ERFPFFDKDT YPLKPLTLAD RVRIVPGGSS IRTGAYLAPG
VVCMPPMYVN VGAYVDEGTM IDSHALVGSC AQIGKRVHLS AAAQIGGVLE PVGARPVIIE
DDVFVGGGCG IYEGCLVRKG AVLAPGVILT GSTKLYDLVH ERILAPAPGE PLEVPPYAVV
VPGARAVRSA FGEAHGLSLY TPVIVKYRDA RTNAATALEE SLR
|
|---|
| |