Gene Rmar_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1650 
Symbol 
ID8568302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1913304 
End bp1913987 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003290924 
Protein GI268317205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0762596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGTCT TTCGAAACGT CAGCATTTCG TACCCGTTGC CGGGCGGCCA GCGGCGCCCG 
GTGTTCGAGA ATCTTTCGTT TGAAATTCAA CGGGGGGAGC ACGTCTATCT GATCGGCCCG 
ACCGGCAGCG GTAAGACCAC GCTCATGCGG CTCATTTACA TGGATCTGCT GCCGGAGTCG 
GGCTACTGTC AGGTGGGGGA TTATCGCTCC GATCGGATCA AGCCGGCCGA GATTCCCTAC 
CTGCGTCGCA CGCTGGGCGT GGTGTTTCAG GATTTCCAGC TCCTGCCCGA TCGCAACGTG 
TACGAGAACG TGGCCTTTGC GCTGTACGTG ACGGGAAAGC GCGGGGCCGA AGTGAAAACC 
CGGGTGCTGC AGGCGCTGAC GCTGGTGGGA TTGAGCCACA AGCGGCGGCG CTATCCGCAC 
GAGCTTTCCG GCGGCGAGCA GCAGCGCGTG GTGATCGCCC GGGCCATCGT CAACGATCCC 
TGGATTCTGC TGGCCGACGA GCCCACGGGC AACCTGGACC CGCGCGTGGC CGACGAGATC 
ATGGAGCTGC TCCTGAACCT GCACCGCCAG GGGATGACGC TGCTCATGGC CACGCACGAT 
TATCGTCTGG TCAAGAAATA TCCGGCGCGG ACGCTGGCCA TCCTGAACGG GCAGCTCGTC 
GAAGTCGATC CGCGCACGCT CTGA
 
Protein sequence
MIVFRNVSIS YPLPGGQRRP VFENLSFEIQ RGEHVYLIGP TGSGKTTLMR LIYMDLLPES 
GYCQVGDYRS DRIKPAEIPY LRRTLGVVFQ DFQLLPDRNV YENVAFALYV TGKRGAEVKT 
RVLQALTLVG LSHKRRRYPH ELSGGEQQRV VIARAIVNDP WILLADEPTG NLDPRVADEI 
MELLLNLHRQ GMTLLMATHD YRLVKKYPAR TLAILNGQLV EVDPRTL