Gene Rmar_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1635 
Symbol 
ID8568287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1895799 
End bp1896593 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID 
ProductCRISPR-associated RAMP protein, Csm3 family 
Protein accessionYP_003290909 
Protein GI268317190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000227023 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACC AGATGATCAC CGGTAAACTG GTCAAAAAAA TTCAGGTGCA GGGTTTTATC 
AAAGCACTTA CCGGCCTGCA CATTGGCGGA TCGAATCTGG GCATGAGCAT CGGCGGGGCC
GATGCTACGG TCGTCCGCAA TCCTCTCACG AATGAACCGT ACATTCCCGG TTCTTCGCTG
AAGGGCAAAA TGCGCGCGCT GTTAGAACGT GTGCATGTCG GAGAGCAATA TGCAGAAAAT
TTCAGTAAAG TGCCCAATTT TGTTGAGAAC TTTGTATTTC ACGATATTCG TCATCCTATT
GTGCAGTTGT TTGGCACTAC GCCCGAAGAA GTGCGCAAGC GCGATCTGGC AGACCAGCCC
GTCGGACGGC TGATCGTACG TGACTGTTTG CTGACGCGCA AAAGCGCGCA GCGTTTGTTC
GGCAGTAAGA CCACCGATAT GCCCTATACG GAGGTCAAAA CGGAGGTAGC CATCGACCGC
GTGACTTCGG CGGCGGTGCC GCGCCAGTTG GAGCGCGTAC CGGCCGGGGC CGTCTTCCGG
ATGGAACATA TTATCAATGT GTATGAGGGT GACGATGAAA GCAGGCTGCT GAATTTGCTC
TTTGAGGGCC TGTTGCTTCT GCAGAACGAT TATCTGGGCG GTAAAGGGTC GCGGGGAAGT
GGGCAGGTGC GCATTGTGGT GGGGCGCCTG CGGTACAAGG ACCGCAGCAT CTACGAGGAG
CGAGGTGACT GGCAGCCGTA TGAAGCGGTG ACAATACCTC AGGAACTCCA GGTACGCTCT
CGGACGGTCT CATGA
 
Protein sequence
MENQMITGKL VKKIQVQGFI KALTGLHIGG SNLGMSIGGA DATVVRNPLT NEPYIPGSSL 
KGKMRALLER VHVGEQYAEN FSKVPNFVEN FVFHDIRHPI VQLFGTTPEE VRKRDLADQP
VGRLIVRDCL LTRKSAQRLF GSKTTDMPYT EVKTEVAIDR VTSAAVPRQL ERVPAGAVFR
MEHIINVYEG DDESRLLNLL FEGLLLLQND YLGGKGSRGS GQVRIVVGRL RYKDRSIYEE
RGDWQPYEAV TIPQELQVRS RTVS