Gene Rmar_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1622 
Symbol 
ID8568274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1877093 
End bp1878199 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID 
Productpeptidase M20 
Protein accessionYP_003290896 
Protein GI268317177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTT CGATCGCGCA GGCTGTTGCC ACCGAGGTTA TCGAGCTGCT CAAATCGCTC 
GTACGGTTTC CGTCGCTGAG CCATCAGGAG GCCGAGATTG CCGATTTTGT CGAGCACTAT
GTGCGCCAGG CCGGCCTACC CGTTCGCCGG ATGGACAACA ACGTCTACTT CTGGCTGGGC
GAAGGGGAAG ACCGGCTGCT GCTGAACTCC CATCTGGACG TGGTGCCGCC TTCGGCCGAC
CATCCGTTCG ATCCCTTCGA ACCGGTGGAG GTCGATGGCA AGCTGTACGG CCGGGGCACG
GTCGATGCCA AAGCCAGCGG CGCAGCCATG ACCACGGCGC TGCTGTCGCT GGCGCGCGAA
GGCTGGCGGC CGCCGAACGG ACAGGTCATC GTGGCGCTGA CGGCCTGCGA GGAGACCGGC
GGCGGCTACA ACGGACTGGA GGCGCTGCGG CCCCATCTGC CTCCGCTGCA GGCCGCCATC
GTGGGCGAGC CCACCTGCCT GCAGCCCTGC GTGGCCCAGA AAGGATTGCT GATCCTGAAA
CTGCACGCGC GCGGCCGCAC GGCCCACGCC GCCCGGCCCC ATCTGGGCGA CAACGCCATC
CTGCGGGCCG CCCGCGACAT CCAGCGCCTG AGCCGGTTCC GCTTCGACCG GGCCGATCCG
TTCCTGGGCG CTCCCACGCT GACCGTTACC ACCATCCAGG GTGGCACGGC GCACAACGTG
GTGCCGGAGC ACTGCACCTT TACGCTCGAC ATTCGCACGA CGCCGGCCTA CACGCACGCC
GAGATCGTGC AGTTGCTGGC GGGCGTGGTC GAATCGGAGA TCGAAGTGCA CAGCGACCGC
TTCATTCCGG TGGCCACCCC GGTCGATGCC CGCATCGTGC AGGCATGCCT GCGGGCCAAT
CCGGGCAGCC GCCCCTTCGG CTCGCCGACC GCCTCGGACT GGATCTTTCT GCACGACATC
CCCACCGTCA AACTCGGTCC GGGTCCCAGC GAGCGTTCGC ACACCGGCGG CGAACACATC
GAACTGGACG AACTGGTGCG CGCCGTCCGG GTCTATCGCG ACATCATCCG CCACTACTAC
GCCCTCGGCG AAGAAAGCCG GGCCTGA
 
Protein sequence
MSGSIAQAVA TEVIELLKSL VRFPSLSHQE AEIADFVEHY VRQAGLPVRR MDNNVYFWLG 
EGEDRLLLNS HLDVVPPSAD HPFDPFEPVE VDGKLYGRGT VDAKASGAAM TTALLSLARE
GWRPPNGQVI VALTACEETG GGYNGLEALR PHLPPLQAAI VGEPTCLQPC VAQKGLLILK
LHARGRTAHA ARPHLGDNAI LRAARDIQRL SRFRFDRADP FLGAPTLTVT TIQGGTAHNV
VPEHCTFTLD IRTTPAYTHA EIVQLLAGVV ESEIEVHSDR FIPVATPVDA RIVQACLRAN
PGSRPFGSPT ASDWIFLHDI PTVKLGPGPS ERSHTGGEHI ELDELVRAVR VYRDIIRHYY
ALGEESRA