Gene Rmar_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1621 
Symbol 
ID8568273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1875945 
End bp1877012 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content68% 
IMG OID 
Productpseudouridine synthase, RluA family 
Protein accessionYP_003290895 
Protein GI268317176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGC AGGAAGTTTG CATTCAACTC GAAGTGCCGC CGGGTTACCG GGAAGGGGGG 
CGACTGGATG CCTACCTGGC GCGCTTTCTG GCGCAGGCTT CGCGCACGAA GATTCAGCGC
GGCATCCGGG AAGGACGGGT GACCGTGAAC GGGGTCGTCG TGCAGAAGCC GGCCTACACG
GTGCAGCCCG GCGACGTGAT CACGCTGCGC ATCCTGCGGC CGCCGCCGGT CGAGATCGTT
CCCGAGCCCA TTCCGCTGGA CATCGTTTAC GAGGACCCGT ATCTGATCGT CGTCAACAAG
CAGGCGGGGC TGGTGGTGCA TCCGGCCCGC GGTAACCGAT CGGGTACGCT GGTCAACGCG
CTGCTCTACT ACATCGGAAG CGGTCCGGTG CGGTTTGACG AAGAAGACGA CCTGCCCGAG
GACGACGAGA TCGGGCTTTC GATGGTCAGC ACCGGTCCGA CCGAAGCGAA ACTGGAGGCG
CCGCGCCCCG GCATTGTGCA CCGGCTGGAC AAGGACACGA CCGGGCTCAT CGTGGTGGCC
AAGGACGACG TGACGCACAC CGGGCTGGCC CGCCAGTTCG AGCACCGGAC GATCGCCCGC
ACCTACCTGG CAATCGTCTG GGGCGTGCCC GATCCACCAC GGGGACGTAT TGAGGCGGCC
ATCGGGCGCG ACCCGCGCGA CCGGCAGCGC ATGGCCGTCG TGCCCGACGA TCGGGGCAAA
CGGGCCGTGA CGCACTACGA GGTCGTCGAG GCGTTGCCGG CCGCCGCGCT CGTGCGCTTC
AAGCTGGAGA CGGGCCGTAC GCATCAGATC CGCGTGCATG CCCGGCACAT CGGCCATCCG
GTGCTGGGCG ACCCGACCTA CGGCGGGCGC ACGATTCGCT ACGGGCCGCA TACGCCCCGA
CGCAGGGCTT TCTACGATCA ACTGTTTGCA CGGCTGACGC GTCAGGCCCT GCACGCGCAT
ACGCTGGGGT TCCGGCACCC CCGTACCGGC GAATGGCTCG AGTTCGAGGC GCCCCTGCCG
GAAGACATGG CCTGCGCGCT GGAGCAGCTG CGCCAGGATC CCCTGTAG
 
Protein sequence
MELQEVCIQL EVPPGYREGG RLDAYLARFL AQASRTKIQR GIREGRVTVN GVVVQKPAYT 
VQPGDVITLR ILRPPPVEIV PEPIPLDIVY EDPYLIVVNK QAGLVVHPAR GNRSGTLVNA
LLYYIGSGPV RFDEEDDLPE DDEIGLSMVS TGPTEAKLEA PRPGIVHRLD KDTTGLIVVA
KDDVTHTGLA RQFEHRTIAR TYLAIVWGVP DPPRGRIEAA IGRDPRDRQR MAVVPDDRGK
RAVTHYEVVE ALPAAALVRF KLETGRTHQI RVHARHIGHP VLGDPTYGGR TIRYGPHTPR
RRAFYDQLFA RLTRQALHAH TLGFRHPRTG EWLEFEAPLP EDMACALEQL RQDPL