Gene Rmar_1613 details

Gene Information

• Locus tag: Rmar_1613
• ID: 8568265
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1868512
• End bp: 1869177
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 64%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003290887
• Protein GI: 268317168

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGCATA GAACGCGCAT CGTCAAGAAG ACCCAGCGTC CGCGTTCGGA GGAAGCGGAA 
CAGCAGGACC GTCTGGCGCT GCTTCAGCAG ATGAGCGACG AGGACCTGAT GGAGCAGTTC 
CAGGCGGGCA CCGTCGAGGC GTTCAACATC CTGGTGGAAC GCTACTCCGA GCGCCTGATG 
CACTACCTCT ACGGCTTCCT CGGCGACGCC CGTCGTTGCG AGGACCTGCT GCAGGAAACC 
TTCCTGCGCG TCTACCGCAA CCGGCACTCC TACCAGCGGA TCGCCAAGTT CTCGACCTGG 
CTCTACACGA TCGCCGGCAA CCTGGCCCGC TCGGAGTACC GGAAGCGCAA GCGGCGGCGC 
GTCTACTCCA TCCAGTCGGT CAACCGCGAC GACGAGGAGT ACGAAATCGC GCTGCCCGAC 
GAGACGTTCT CGCCGGACAA GCACGCCGAA AGCATCATCC AGGACAAGTA CATTCAGGAG 
GCGCTCAGCA GCATCCCGCC CGACTTCCGG GAGGTGGTCG TGCTGCGCGA CGTGCAGCAG 
CTCACCTACG AGGAGATCGC CCAGATCACC GGGCTCCCCA TGGGGACGGT CAAGAGCCGC 
ATCAACCGTG GGCGCACGAA GCTGCAGGCG CTCCTGAAGG ACATTTACGC CCCCGAGGAA 
GTCTGA 

 

Protein sequence

MLHRTRIVKK TQRPRSEEAE QQDRLALLQQ MSDEDLMEQF QAGTVEAFNI LVERYSERLM 
HYLYGFLGDA RRCEDLLQET FLRVYRNRHS YQRIAKFSTW LYTIAGNLAR SEYRKRKRRR 
VYSIQSVNRD DEEYEIALPD ETFSPDKHAE SIIQDKYIQE ALSSIPPDFR EVVVLRDVQQ 
LTYEEIAQIT GLPMGTVKSR INRGRTKLQA LLKDIYAPEE V