| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1606 |
|---|
| Symbol | |
|---|
| ID | 8568258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1861257 |
|---|
| End bp | 1862705 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003290880 |
|---|
| Protein GI | 268317161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAA TGCGCGTGCT GGTTACCGGC GCAACGGGTT ATGTGGGCGG TCGGTTGATC
CCGAGACTGC TCGAAGCCGG TTATCCCGTC CGGGCCATGG CACGTGACCG ACGCCGGCTG
GAAGGACGCC CCTGGTCCGA CCGCATCGAG ATCGTCGAGG CCGACGTGCT GCGCCCCGAA
ACACTTCCGG ACGCCGTAAA CGGCATCCAT ACCGTATTTT ATCTGATCCA CGCGCTGGGT
GGCGGCGATG ATTTTATGCA GAAAGAGCAG GCCGGCGCCC GCCATCTTGC AGAAGCGGCC
GCTCGAGCCG GCGTCTCCCA TATCATCTAT CTGGGAGGTC TGCAGCCCCC GCGACCGGTC
TCGCGCCATC TGGAAAGTCG CCGGCTTACA GGCGAGGCCC TTCGAAGCGG TCCGGTTCCT
GTTACAGAGC TGCGCGCCGG GATCATTCTG GGATCGGGAA GTCTGTCCTT TGAACTGATT
CGTTACCTGA CAGAGCGCCT GCCGGTGATG ATCACGCCGC GCTGGGTGAA AATCCCCACG
CAGCCGATCG CCATCCGCAA CGTACTGGAT TATCTGATGG CGGCGTTGCA GCGTCCTCCG
GAGCGCTCCC GGATCGTGGA CATCGGAGGA CCGGACGTGC TCACCTACGC CGACCTGTTT
CGCCTTTATG CCCGGCTGCG CGGTCTGCGG CGCTGGATCG TTCCTGTCCC GGCGCTCACG
CCTCGGCTTT CCTCGTACTG GATCGGGCTG GTCACGCCCC TGCCTGCGCG CATCGCGCGC
AAGTTGATCG ACAGCCTTAA AGCGCCGACG GTATGCCGCG ACGATCTGGC CCGCCGACTT
TTTCCTGAAG TAACACCGCT TTCTGCCGAA GCTGCCATGC GGCTGGCCCT TCAGCGTCTC
GACGCCGGCC ATGTCGAAAC CATCTGGTTC GGGGCCTATT CCTCGGGGGA TGAGGAGCGG
CTTACCACCC ATTTAGAGGA CCGCGAAGGC CTGCTGCGCG ACACCTACTC CATCTGGATA
GCGGCTGCGC CATCTGCCGT CTTTGCTTAC CTCAAGCGGC TGGGAGGAGC CCGGGGGTGG
CCCTATGCCA ACGGACTCTG GCGCCTGCGT GGCGTGCTGG ATCGGCTGGT AGGCGGCATT
GGTTATCGCC GTGGCCGCCG TCATCCGGAG GAATTGTACG CAGGCGACGC GGTTGATTTC
TGGCGGGTCG AAGCGCTCGA GCCCGAGCGT CGTCTCCTGC TCCGTGCCGA GATGAAAGTG
CCGGGACGCG CCTGGCTCCA GTTCGTCGTC CAACCGGAAG GAAAAGGGAC CCGCTTGATC
CAGCAGGCGC TTTTCGAGCC GCGAGGTCTG GCGGGGCTGC TCTACTGGTA CAGCATCTAT
CCGCTCCATC GCTTCGTCTT TCGCGGCATG CTCCGCGCCA TCAAACAACA GGTAGAAACC
AGCAGGTAG
|
|---|
| Protein sequence | MPEMRVLVTG ATGYVGGRLI PRLLEAGYPV RAMARDRRRL EGRPWSDRIE IVEADVLRPE
TLPDAVNGIH TVFYLIHALG GGDDFMQKEQ AGARHLAEAA ARAGVSHIIY LGGLQPPRPV
SRHLESRRLT GEALRSGPVP VTELRAGIIL GSGSLSFELI RYLTERLPVM ITPRWVKIPT
QPIAIRNVLD YLMAALQRPP ERSRIVDIGG PDVLTYADLF RLYARLRGLR RWIVPVPALT
PRLSSYWIGL VTPLPARIAR KLIDSLKAPT VCRDDLARRL FPEVTPLSAE AAMRLALQRL
DAGHVETIWF GAYSSGDEER LTTHLEDREG LLRDTYSIWI AAAPSAVFAY LKRLGGARGW
PYANGLWRLR GVLDRLVGGI GYRRGRRHPE ELYAGDAVDF WRVEALEPER RLLLRAEMKV
PGRAWLQFVV QPEGKGTRLI QQALFEPRGL AGLLYWYSIY PLHRFVFRGM LRAIKQQVET
SR
|
|---|
| |