Gene Rmar_1603 details

Gene Information

• Locus tag: Rmar_1603
• ID: 8568255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1857801
• End bp: 1858538
• Gene Length: 738 bp
• Protein Length: 245 aa
• Translation table: 11
• GC content: 64%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003290877
• Protein GI: 268317158

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.831368
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAT GCTTTGTTGT TTTTGGCGCG ACTGGAGGGA TCGGAAGGGT GCTGGTGGAC 
GAAGTGCATC GACGCGGCCT TGGCCCCATG GTGCTGGTAG GACGTCGCGC CGAACCACTT 
TACGAGCTGG CCACCCGTTA CGGGGCAACA GCCGTCGTGG CCGATGCGCG CAAGCCTGAA 
GCGGTCCAGC GCGTTTTCGA AACAGCCCGA CAGCACCACG AGCGTGTGGC CGGCGTGGCG 
CATCTGGTCG GCTCGCTTCT GCTCAAGTCA CTGGTGGCCA CGCGGGACGA AGAGATGGAA 
GACGTGCTGG CCCAGAACTT CTGGAGTGCC TTCTATGTGT TGCGCGAAAG CGTCCGGGCC 
ATGATGAAAG ACGGCGGGAG CATCGTACTG ACGGCTTCGG CGGTGGCCCT GCAGGGCTTG 
CCCAACCACG AAGCCATCGC GGCGGCCAAG TCGGCCGTCG TGGGACTGGC ACGCGCTGCC 
GCCGCCTCCT ACGCGCGCCG GGGCATCCGC ATCAATGTTG TGGCCCCGGG CCTGACCGAA 
ACGCCCATGA CGGCCTCGCT TTTCGCCAGT CCGCAGGCCA TCGAACGTTC GCTGCGCTAC 
CATGCTCTTG ACCGGCTCGG CAAACCCGAA GATGTCGCCC GCGCAATCGC TTTTTTACTG 
AGCCCCGACG CTTCCTGGAT TACCGGCCAG GTGCTGGCCG TCGATGGGGG GCTCTCAAGT 
CTCAAAGTGC TGGACTGA 

 

Protein sequence

MSECFVVFGA TGGIGRVLVD EVHRRGLGPM VLVGRRAEPL YELATRYGAT AVVADARKPE 
AVQRVFETAR QHHERVAGVA HLVGSLLLKS LVATRDEEME DVLAQNFWSA FYVLRESVRA 
MMKDGGSIVL TASAVALQGL PNHEAIAAAK SAVVGLARAA AASYARRGIR INVVAPGLTE 
TPMTASLFAS PQAIERSLRY HALDRLGKPE DVARAIAFLL SPDASWITGQ VLAVDGGLSS 
LKVLD