Gene Rmar_1556 details

Gene Information

• Locus tag: Rmar_1556
• ID: 8568208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1813962
• End bp: 1816034
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 67%
• Product: phenylacetic acid degradation protein paaN
• Protein accession: YP_003290831
• Protein GI: 268317112

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGACGA CCGTCTATCT CGGCAAAGTG CAGAGCTTCG CCCAGGGCCG CTGGCACACA 
CCTGCAGGCG AAGGTCGCCC GGTATTCCAT GCCGTCACCG GCGAACCCAT CGCCGAAATT 
TCCAGCGAAG GACTGGATTT CAAGGGCATG CTGGACTATG CCCGCACCGT AGGCGGCCCG 
AAGCTACGCC AGATGACCTT CCACGAACGC GCCCGCATGC TCAAGGCGCT GGCCCTTTAC 
CTCAACGAAC ACAGGGCCGA GCTGTACGAG CTCTCGCGGG CTACCGGCGC CACGAAGCAG 
GACGCCTGGC TCGACATCGA CGGCGGCATC GGAACGTTCT TCGTCTATGC CAGCAAAGGC 
CGCCGCGAGC TGCCCGACGA GCGCTTCCTG CTCGAGGGCG AACCCGAACG CATCTCGCGC 
GGCGGGACTT TTCTGGGCCA CCACCTGCTC GTGCCGCTCG AAGGCGTGGC CATCCACATC 
AACGCCTTCA ACTTCCCCTG CTGGGGCATG CTTGAAAAAC TGGCCCCCAC CTTTCTGGCC 
GGCATGCCCG CCATCGTCAA GCCGGCTTCG GTAACGGCCT ACGTGGCCGA GCGGGTCGTC 
CGACTCATGC TCGAGTCCGG CATCCTGCCC GAAGGCGCCC TCCAGCTCAT CTGCGGGGGC 
GTGGGCGATC TGTTCGACCA CCTGACCGGC CAGGACGTCG TGACCTTCAC GGGATCGGCC 
GAAACCGGTC TGCGGCTGAA GTCGCACCCC ACCATCCTGC GCGAAACGGT GCGCTTCAAC 
ATGGAAGCCG ACTCGCTCAA CTTCTCCATG CTCGGCCCCG ACGTCACGCC CGACCTGCCG 
GAGTTCGAGC TGTTCATCAA CGAGGTGGTC CGGGAGATGA CGATCAAGAC GGGCCAGCGC 
TGCACGGCGA TCCGTCGCAC GCTGGTGCCG GCCGATCGGG TGGACGCGGT GCTCGAAGCG 
CTCACCAGGC GCCTGCGCGA AGTGGTGGTG GGCGACCCGG CCAACGAGCA GGTGCAAATG 
GGACCGCTCG TGAGCCGCGA TCAGGTGGCC GAGGTGCAGG CCCGCCTGGA AGAGCTGGCC 
GCGGCCGGCG AGATCGTCTG CGGCCGCGAC GGCTTTTCCG TGATAGACGC CGACCCCGAA 
CGCGGCGCTT TCTTCCCGCC CACCCTTCTC TACTGCGCCC GTCCCTTCGA GCACACGGCG 
CCGCACGAAG TGGAAGCTTT CGGGCCGGTC AACACGGTCA TGCCCTATCG GGATCTGGAC 
GAAGCCATCC GTCTGGCCCG CATGGGCCGC GGGAGCCTGG TGGGCTCGAT GGTGACGGCC 
GATCCGGACG TGGCCCGCAC GGTCGTGTTC GGCACGGCAC CTTACCACGG CCGCCTGCTG 
ATCCTCAACC GGGAATGCGC CAAAGAAAAC ACGGGCCACG GCTCCCCGCT CCCCCATCTG 
GTGCATGGCG GCCCCGGCCG CGCGGGCGGC GGCGAGGAAA TGGGCGGCAT CCGCGGGCTC 
TATCGCTACA TGCAGCGCAC CGCCATCCAG GGCTCGCCCG ACATGCTGAC GGCCATCGGC 
AACCAGTGGA TGCCCGGTGC CTCCCGACCG GAAGCCGACG TACATCCCTT CCGCAAGTAC 
TTCGACGAGC TGCGCATCGG CGAGACCTAC ACGACCGCCC GACGCACCGT CACCGAGGCC 
GACATCGTCA ATTTTGCGGG CGTCAGCGGC GACTTCTTCT ACGCGCACAT GGACGAGCTG 
GCCGCCCGCG AAAGTGAGGT GTTCCAGGGA CGCGTGGCGC ACGGCTACTT CGTGCTCTCG 
GCCGCGGCCG GCCTGTTTGT CGATCCGCGG CCGGGCCCGG TGCTGGCCAA CTACGGTCTG 
GAGAACCTGC GCTTCACGAA GCCGGTCCGT CCGGGCGACA CGATCCAGGC CCGGCTGACC 
GTGAAGCAGA AAATTCCCCG CGAAGCCCGC GAGGGCGAGC GGCCCGGCGG CGTCGTCCGC 
TGGCACGTGG ACGTGACGAA CCAGGACGAC GAGCTGGTCG CCACCTACGA TATCCTGACC 
CTCGTGGCAC GCCGCCCCGA ATCGGAAGCC TGA 

 

Protein sequence

METTVYLGKV QSFAQGRWHT PAGEGRPVFH AVTGEPIAEI SSEGLDFKGM LDYARTVGGP 
KLRQMTFHER ARMLKALALY LNEHRAELYE LSRATGATKQ DAWLDIDGGI GTFFVYASKG 
RRELPDERFL LEGEPERISR GGTFLGHHLL VPLEGVAIHI NAFNFPCWGM LEKLAPTFLA 
GMPAIVKPAS VTAYVAERVV RLMLESGILP EGALQLICGG VGDLFDHLTG QDVVTFTGSA 
ETGLRLKSHP TILRETVRFN MEADSLNFSM LGPDVTPDLP EFELFINEVV REMTIKTGQR 
CTAIRRTLVP ADRVDAVLEA LTRRLREVVV GDPANEQVQM GPLVSRDQVA EVQARLEELA 
AAGEIVCGRD GFSVIDADPE RGAFFPPTLL YCARPFEHTA PHEVEAFGPV NTVMPYRDLD 
EAIRLARMGR GSLVGSMVTA DPDVARTVVF GTAPYHGRLL ILNRECAKEN TGHGSPLPHL 
VHGGPGRAGG GEEMGGIRGL YRYMQRTAIQ GSPDMLTAIG NQWMPGASRP EADVHPFRKY 
FDELRIGETY TTARRTVTEA DIVNFAGVSG DFFYAHMDEL AARESEVFQG RVAHGYFVLS 
AAAGLFVDPR PGPVLANYGL ENLRFTKPVR PGDTIQARLT VKQKIPREAR EGERPGGVVR 
WHVDVTNQDD ELVATYDILT LVARRPESEA