Gene Rmar_1539 details

Gene Information

• Locus tag: Rmar_1539
• ID: 8568191
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1795727
• End bp: 1796530
• Gene Length: 804 bp
• Protein Length: 267 aa
• Translation table: 11
• GC content: 72%
• Product: NHL repeat containing protein
• Protein accession: YP_003290814
• Protein GI: 268317095

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTCGGGG CTTCGCTGGC CGCCGCGCAG ACGCCCGACA CGCTGCACCT GGAGCCGCGG 
GCGGCCTTCG TCGAAGCCCG GGCGCTGGAC GTCGATCCCA CCGGACGTCT CTACGTGGCC 
GACGCGGCCC GGCACGTGGT GGTCCGGCTG ACGCCCGAGG GGCACGTCGA AGAGGAACTG 
GGCGGTCCGG GCAGCGCACC GGGACGCTTC GATACGCCGG TAGCCGTCGA TGCCCGGGCC 
GGTCTGTCGT TCTGGGTGGC CGAGGCCGGA AACCGACGCC TGCAACGGCT CACCCGGCAG 
GGCATGTCCC TGGAAATTGC CGCCCTTCCG GACGGCGTCA GCCCGATTGC CGTGCGCTGG 
CTCGGCCGGT GGCTTTTCGT GCTGGACGCG GCAGGAGGGC AACTCTGGCG ACGTGGACCG 
GACGGAAGCT GGCAGGCGGT CGGTGGCACC GGCATCGACG AACCGCTGCA GGCTCCGGTG 
GCGCTGGCGG TCGGCCCCGG CGATCGGCTG CTGGTCGCCG ATGCGGCGCG ACGCGTGGTG 
CTTGCCTACG ACCGGCGGGG CACCTTCGAG CGGATCTGGA CGCCCACGCT ACCCGGCACA 
CCCCGCACGC TGGCCGCGCA GGGCGATACG CTCTGGGTGG TGCTCGATCG CAAGCTCGTG 
CGCTATCTGC CCGACGGACG CCTGGAAACC GTGGGCCAGC TTTCGTTCGA CGTGGTGGGA 
CTGGTATGGG AGGGCCGGCG CGGGTGGCTG CTGTCGCGGC AACGACTCTA CCGCGCTCAG 
TTGTCGGCGC CCGGACGCAG GTAG 

 

Protein sequence

MLGASLAAAQ TPDTLHLEPR AAFVEARALD VDPTGRLYVA DAARHVVVRL TPEGHVEEEL 
GGPGSAPGRF DTPVAVDARA GLSFWVAEAG NRRLQRLTRQ GMSLEIAALP DGVSPIAVRW 
LGRWLFVLDA AGGQLWRRGP DGSWQAVGGT GIDEPLQAPV ALAVGPGDRL LVADAARRVV 
LAYDRRGTFE RIWTPTLPGT PRTLAAQGDT LWVVLDRKLV RYLPDGRLET VGQLSFDVVG 
LVWEGRRGWL LSRQRLYRAQ LSAPGRR