Gene Rmar_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1536 
Symbol 
ID8568188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1790168 
End bp1791838 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC-1 domain protein 
Protein accessionYP_003290811 
Protein GI268317092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCCTG CTGTTGCCAC GCGGGCGCGG CGGGCCCGCC AGATCGCCGA AGTGCTGCTC 
CGCCACGGCC TGGGCTATCT TGTGAGTATC TTCGGCCTGG AGCGCTTCGT GCCTTTGCAT
CGGGGTCTGC TGGGCCATCC GCGCCGCCCC GAACCCTATG CCGCGCCCGA GCACCTGCGC
ATGGCGCTCG AAGAGCTGGG CGCCGCCTGG ATCAAGCTCG GCCAGTTTCT GGCCACCCGC
GCCGACCTGC TTCCCCCTTC CTACCAGCGC GAACTGGCCC GTCTGCAGGA TGCCGCCGCC
CCCGTCCCGG GCGCGCAAAT CCAGGCCGTC ATCGAGGCCG AACTGGGACG CCCGGTCTCC
GAGCTGTTCG CCCGCTTCGA GCCCGAACCA CTGGCCGCCG CCTCGATCGG CCAGGCCCAC
GCGGCCACCC TGCCCGACGG CACCGAGGTG GTCGTCAAGG TGCGACGCCC CGGTGTCGTC
GAACAGGTCG AGCAGGACCT GGAGCTGCTG CTGACCCTGG CCCACACCGC CAGCCGCCAC
TGGGAACTGG CCGAAACCTA CGACATCGTG GGCATCGTGC AGGAATTCGC GCTGACGCTC
CGAGCCGAAC TGGACTACCT GCGCGAAGGC CGCAATGCCG AACGCTTCGC CCATAACTTC
GCCGGCAACC CGGCCGTCCA CATCCCCCGC GTGTTCTGGG AGTACACCAC CTCGCGCGTG
CTCACCCTGG AGCGCATCCG GGGCATCAAG ATCGACAACC TGACCGCGCT CGACACCGCC
GGCTTCGACC GCACCGAACT GGCCGGACGC GTGGCGCGCA TTCTGATGCA GATGGTCTTT
GAGGACGGCT TTTTTCATGC CGATCCGCAC CCCGGCAACT TTTTCGTCGA GTCTGACGGC
ACCATCGGAC TGATCGACTT CGGCATGGTC GGCGTCGTAG ACGGCCCCAC GCAGGATCGG
CTGGCGCAAC TGCTGCTGGC GCTCGCACAG CAGGATCCGG ATCGGCTGGT GGACGCCTTC
CTGGAGCTAG GTGTGGCCCG ACGGTATGTG GACCGCCTCG CGCTTCGCGA GGACCTGCGC
CATTTCGTGC TGGCCTACTA CGACCGCCCG CTGCGTGAGC TGCGCCTGGA GCCGCTGCTG
AAGGAAGCAC TGGCCATCGT TCGTCGCCAT CACCTGCACC TGCCCACCAA CCTGGTGCTG
CTGGCGAAAA CCATCATGAT GGCCGAAGGG CTGGCCGCCC GGCTGGCCCC CGACTTTCAG
GTGGCCACGC TATTGCCCGG CTACGTTCGC CGCCTGCTGT TGCACCGCTA CCTGCCGCTG
CGGTGGATTC GCCGGTTGAG CTGGACAGGC CTTGAGGCGG CCGAGTTCGG GCTGGAGCTT
CCGCGCCAGC TCCGGCGCCT GCTGCACGCG CTGGAGCAGG GCAACCTGCA ACTGGGCATG
CGGCCCGAAG GCTTCGAGCC GCTCATCGCC CGGCTGGAGC GACTGACCAA CCGACTGGTG
CTGGGCATGA TCACGGCCGC CTTCATCGTG GGCCTGGCCG TGCTGATGAC GGCGTTTCGC
CTGCCCGGCA TCGAGCACCT GATCGGCCCG CTTTTCGGAC TGGGCTTTCT GCTGACCGCC
CTGCTGGCCG CCTACCTGAT CTGGGTGATT CTGCGCTCCG GACGAATCTG A
 
Protein sequence
MPPAVATRAR RARQIAEVLL RHGLGYLVSI FGLERFVPLH RGLLGHPRRP EPYAAPEHLR 
MALEELGAAW IKLGQFLATR ADLLPPSYQR ELARLQDAAA PVPGAQIQAV IEAELGRPVS
ELFARFEPEP LAAASIGQAH AATLPDGTEV VVKVRRPGVV EQVEQDLELL LTLAHTASRH
WELAETYDIV GIVQEFALTL RAELDYLREG RNAERFAHNF AGNPAVHIPR VFWEYTTSRV
LTLERIRGIK IDNLTALDTA GFDRTELAGR VARILMQMVF EDGFFHADPH PGNFFVESDG
TIGLIDFGMV GVVDGPTQDR LAQLLLALAQ QDPDRLVDAF LELGVARRYV DRLALREDLR
HFVLAYYDRP LRELRLEPLL KEALAIVRRH HLHLPTNLVL LAKTIMMAEG LAARLAPDFQ
VATLLPGYVR RLLLHRYLPL RWIRRLSWTG LEAAEFGLEL PRQLRRLLHA LEQGNLQLGM
RPEGFEPLIA RLERLTNRLV LGMITAAFIV GLAVLMTAFR LPGIEHLIGP LFGLGFLLTA
LLAAYLIWVI LRSGRI