Gene Rmar_1535 details

Gene Information

• Locus tag: Rmar_1535
• ID: 8568187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1788153
• End bp: 1790084
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 66%
• Product: copper-translocating P-type ATPase
• Protein accession: YP_003290810
• Protein GI: 268317091

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGAGG ACTTCCGGCG GCGCTTCTGG ATTTCCCTGG TCCTGACGGT GCCGATTCTG 
GTGCTTTCGC CCATGATCCA GGCTTTTCTG GGGCTGGGCG AAGCGCTGCG CTTTCCGGGT 
GACCTGTGGG TGCTCTGGGC GCTCTCGTCC GTCGTGTTCT TCTATGGAGG CTGGCCGTTC 
CTGAAAGGCA TTGCCGAGGA GCTGCGCCAG CGCAATCCCG GCATGATGAC ACTGATCGCC 
ATCGCCATCA GCGTGGCCTA TCTCTACTCG AGCGCGGTGG TCTTCGGACT GGCCGGCAAA 
ATCTTTTTCT GGGAGCTGGC CACCCTGATC GATGTGATGC TGCTGGGGCA CTGGATCGAA 
ATGCGCTCGG TGCTGGGGGC GTCGCGGGCG CTGGAAGAGC TGGCCCGCCT GATGCCGACC 
GAAGCCCACA GGGTGATGCC GGATGGCTCG ATCCAGGATG TGCCGCTCGA TCAGCTGCAG 
GCGGGCGATC GCGTGCTGGT GCGCCCCGGC GAGAAAATTC CGGCCGACGG CGTGATCGTC 
GAAGGCCACA CCACGGTCAA CGAGGCGCTG CTTACCGGCG AATCGGCACC GGTCGAGAAA 
AAGGTCGGCG ACACGGTGAT CGGTGGCGCC ATCAACGGCG AGGGGTCGCT CGTCGTGGAG 
GTGCAGAAAA CCGGCGCCGA AAGCTACCTG TCGCAGGTCA TCGAGCTGGT CCGTCAGGCA 
CAGGAGACGA AGTCCCGGAC CCAGGACCTG GCCAACCGGG CCGCCCGCTG GCTCACCGTC 
GTGGCGCTGG GAGGCGGCGC GCTGACGCTG GCGGTCTGGA CGCTGGTCAT GGGCCAGCCG 
TTCGACTTTG CGCTGGAGCG CATGGTGACC GTCATGGTGA TCGCCTGCCC GCATGCGCTG 
GGGCTGGCCG TGCCGCTGGT GGTGGCCGTC TCGACCGCCC TGTCCGCCCA GAATGGGCTG 
CTGATCCGTG ACCGTACGGC CTTCGAAAAT GCGCGCAATC TGCAGGCGGT GATCTTCGAC 
AAAACGGGCA CGCTCACCGA AGGGCGTTTC GGCGTGACCG ACACGCTGGT CTTTCAAGAC 
GGGCTCTCCG AAGAGGAACT GCTGACACTT GCGGCGGCCG TCGAGCAGCA TTCCGAGCAC 
CCGATTGCCC GGGGCATCGT CGAGGCGGTG GCCCATCCCC CGGCCGCCGA GGATTTCGAA 
GCCATCCCGG GCAAAGGCGC GCGGGCCCGC GTCAATGGCG AGGAAGTCCG CGTGGTCAGT 
CCGGGCTACC TGCGCGAGCA CGGGCTGGAG GTGCAGGACG AACGCGTAGA CCGACTGGCC 
GAACAGGGCA AAACGGTGGT GTTTGTCGTG CGCGATGGCC GGGTCGCCGG CGCGATCGCC 
CTGGCCGACG TGATCCGTCC CGAATCGAAA GAGGCCGTGC GCCAGCTCAA AGCGATGGGC 
CTGCAGGTGA TGATGCTCAC CGGCGACAAC CGCCGCGTGG CCGCCTGGGT CGCCCGCGAG 
ATCGGCCTGG ACGACTATTT CGCCGAAGTG CTTCCTGATC AGAAGGCGGC CAAGGTCAGG 
GAAGTGCAGC AGCGCGGGCT GCGCGTGGCC ATGGTGGGCG ACGGGATCAA TGACGCGCCA 
GCCCTGGCAC AGGCCGATGT GGGCATTGCC ATCGGCGCCG GGACCGACGT GGCCATCGAG 
ACGGCCGACA TCGTGCTCGT GCGCAACGAT CCACGCGACG TGGTGTCGAT CCTGCGCCTG 
AGCCGTGCCA CCTATCGCAA GATGGTGCAG AATCTCTGGT GGGCGGCCGG CTACAACATC 
GTCGCCATCC CGCTGGCCGC CGGCGTGCTC TACAACCTAG GCCTGCTATT GAGTCCGGCT 
GCTGGCGCCG CCCTTATGAG CCTGAGTACC GTCATCGTTG CCATCAATGC ACGTTTTCTC 
AACATCGTAT AA 

 

Protein sequence

MVEDFRRRFW ISLVLTVPIL VLSPMIQAFL GLGEALRFPG DLWVLWALSS VVFFYGGWPF 
LKGIAEELRQ RNPGMMTLIA IAISVAYLYS SAVVFGLAGK IFFWELATLI DVMLLGHWIE 
MRSVLGASRA LEELARLMPT EAHRVMPDGS IQDVPLDQLQ AGDRVLVRPG EKIPADGVIV 
EGHTTVNEAL LTGESAPVEK KVGDTVIGGA INGEGSLVVE VQKTGAESYL SQVIELVRQA 
QETKSRTQDL ANRAARWLTV VALGGGALTL AVWTLVMGQP FDFALERMVT VMVIACPHAL 
GLAVPLVVAV STALSAQNGL LIRDRTAFEN ARNLQAVIFD KTGTLTEGRF GVTDTLVFQD 
GLSEEELLTL AAAVEQHSEH PIARGIVEAV AHPPAAEDFE AIPGKGARAR VNGEEVRVVS 
PGYLREHGLE VQDERVDRLA EQGKTVVFVV RDGRVAGAIA LADVIRPESK EAVRQLKAMG 
LQVMMLTGDN RRVAAWVARE IGLDDYFAEV LPDQKAAKVR EVQQRGLRVA MVGDGINDAP 
ALAQADVGIA IGAGTDVAIE TADIVLVRND PRDVVSILRL SRATYRKMVQ NLWWAAGYNI 
VAIPLAAGVL YNLGLLLSPA AGAALMSLST VIVAINARFL NIV