Gene Rmar_1530 details

Gene Information

• Locus tag: Rmar_1530
• ID: 8568182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1783473
• End bp: 1784042
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 68%
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_003290805
• Protein GI: 268317086

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACGCC TGACCGTTCT CTCTCTTTTG CTCGGAAGCG TGCTGGCGTT TGCGGTGGAA 
GCCCAGCCCG CGGACTGGTC CACGCTCTTC GTGCGTGCCA TGCGGCTGAA GGAAGCCGGG 
CAGTACGCCC AGGCCATCCC GCTGGCCGAG CAGGCGCTCA CGCTGGCCCA GGCGCAGTAC 
GGGCCCGAAA ATCGGAGCGT GGGGCTGGCG CTGAACCTGC TGGGCCAGCT GTACACGGCG 
GAAGGAAAAT ACGACGAAGC GGAGGCGTTC CTGAAACGTG CACTGGACAT CTACCACAGA 
TGGTTTGGCG CGCAGTCGCC GGAGAGCGCC GGCGTGCTGA ACAACCTCGG CCGCCTGTAC 
CTGGACCGCG GCCAGCCGGA ACAGGCGGTA TCGGTACTCC AGGAGGCGCT GGCCCGCTTC 
GAGCAGGCCT ACGGGCCCGA AAGCCACCGT CTGCGCTACA CGCTGGAACT GCTCGCCGAG 
GCCTATCAGG CCATGAACCG CCCGGACGAA GCCCGACGCT ATGCGGCGCG GGCCGCCCAG 
CTTCCGCCTC CGCCGCAGGC GCAGCAGTAA 

 

Protein sequence

MRRLTVLSLL LGSVLAFAVE AQPADWSTLF VRAMRLKEAG QYAQAIPLAE QALTLAQAQY 
GPENRSVGLA LNLLGQLYTA EGKYDEAEAF LKRALDIYHR WFGAQSPESA GVLNNLGRLY 
LDRGQPEQAV SVLQEALARF EQAYGPESHR LRYTLELLAE AYQAMNRPDE ARRYAARAAQ 
LPPPPQAQQ