| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1496 |
|---|
| Symbol | |
|---|
| ID | 8568147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1747086 |
|---|
| End bp | 1748762 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_003290771 |
|---|
| Protein GI | 268317052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.289055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA TTGGTTGGAC TTTCTTCTGG GTGGCGATCA CGTTTTCCGT CTACATCGGT
ATCGCCATCT GGAGTCGCGT GAAGGACACG GCCGGTTTCT ACGTGGCCGG GCAGGGCATC
CCGAGCGTTG CCAACGGCGC GGCCGTGGCC GCCGACTGGA TGAGTGCGGC CAGCTTCATC
TCGATGGCGG GGCTGATTTC TTTCATGGGC TATGACGGGG CCGTCTACCT GATGGGCTGG
ACGGGCGGCT ACGTGCTGCT GGCCGTGCTG CTGGCGCCGT TCCTGCGTAA GTTCGGGAAG
TTCACGGTGC CCGACTTCGT GGGCGAACGC TACTACTCCA ATACGGCCCG GGTGGTGGCG
GCTATCGCGG CCCTGTTCGT TTCCTTTACT TACGTGGCCG GGCAGATGCG CGGCGTGGGC
GTCGTCTTCA GCCGCTTCCT GCAGGTGGAC ATCGTTTGGG GCGTGGTCAT CGGCATGGCG
ATCGTCTCGC TCTACGCCGT GCTGGGCGGC ATGAAGGGAA TCACCTGGAC GCAGGTGGCC
CAGTACACCG TGCTGATCAT CGCCTACCTG ATCCCAGCCT TCGCCATTGC CTACACGCTG
ACGGGCATTC CGCTGCCGCA GCTGGCGCTG GGTAAAGTGC TGCCGCGGCT GGACCAGCTC
CAGTACGAGC TGCTGGGCAA CTTCTACAGC CAGCCCTTCA AGGGGAGCTG GGACATGCTG
AACGTCTTCT GCGTGACGTT CGCCCTGATG ACCGGAACGG CCGGTCTGCC GCACGTGATC
GTGCGCTTCT ACACGGTGCG GCGCGTGGTG GATGCCCGCT GGTCGGCCTT CTGGGCGCTG
TTCTTCATCG GCTTGCTGTA CCTGACGGCG CCGGCCGTGG CCATGTTCGC CCGCTACTAT
ATCCTGAATG CGTTCAGCGA GCTGGGGCCG ACGGGCATGC TCGATCTGAG CTGGGTCCAG
AACTGGGCGC AGACCGGTCT GATCCGCACA GGCGAGTGGA GTGAGGGCAT GACGGCGGCT
GCGTTGCTCA GCACGATCGA CCGCGACATT ATCGTGCTGG CCACGCCGGA GATCGCCAAC
CTGTCGGCCT GGGTGGTCGG GCTGGTGGCG GCCGGTGGTC TGGCCGCAGC GCTATCGACG
GCCTCGGGCC TGCTGCTGGT GATCGGCTCG GCCATGGCGC ACGACATCTA CGGCCAGATC
ATCAACCCGA GCGCCCCCGA TCATGTGAAG CTGACGGTGG CCCGCGTGAT GATTTTCCTT
GGTGTGATCA TCGCCGGGTT GCTGGGCATC TTCCCGCCGG GCTTCGTGGC CGAGGTGGTG
GCCTTTGCCT TCGGCCTGGC CTGCTCCAGC TTCTTCCCGG TCATCGTACT GGGCGTGTTC
TGGAAGCGGT GCACCAAGGA AGGGGCCATC GCCGGCATGC TGACCGGTCT GCTCTTTACG
TTTACGCTGA TCGTGCTGAT GCGGGCCGAC CGCGTGCTCG GCCTCGAGGA GCCGATCCTG
AGCAGCTTCC TGGGCATCAA CGCGCAGGGC GTGGGCACGA TCGGTATGAT CTTGAACTTC
ATCGTGACGA TTCTGGTCTC GCTCCGCACG CCGCCGCCTC CGAAGGAAGT GCAGACGCTC
GTGGAGCAGA TCCGTTATCC GCGCGTGCTG CGCGCCGAAG AGCTGGAATC GGCCTGA
|
|---|
| Protein sequence | MSIIGWTFFW VAITFSVYIG IAIWSRVKDT AGFYVAGQGI PSVANGAAVA ADWMSAASFI
SMAGLISFMG YDGAVYLMGW TGGYVLLAVL LAPFLRKFGK FTVPDFVGER YYSNTARVVA
AIAALFVSFT YVAGQMRGVG VVFSRFLQVD IVWGVVIGMA IVSLYAVLGG MKGITWTQVA
QYTVLIIAYL IPAFAIAYTL TGIPLPQLAL GKVLPRLDQL QYELLGNFYS QPFKGSWDML
NVFCVTFALM TGTAGLPHVI VRFYTVRRVV DARWSAFWAL FFIGLLYLTA PAVAMFARYY
ILNAFSELGP TGMLDLSWVQ NWAQTGLIRT GEWSEGMTAA ALLSTIDRDI IVLATPEIAN
LSAWVVGLVA AGGLAAALST ASGLLLVIGS AMAHDIYGQI INPSAPDHVK LTVARVMIFL
GVIIAGLLGI FPPGFVAEVV AFAFGLACSS FFPVIVLGVF WKRCTKEGAI AGMLTGLLFT
FTLIVLMRAD RVLGLEEPIL SSFLGINAQG VGTIGMILNF IVTILVSLRT PPPPKEVQTL
VEQIRYPRVL RAEELESA
|
|---|
| |