| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1495 |
|---|
| Symbol | |
|---|
| ID | 8568146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1745830 |
|---|
| End bp | 1747002 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003290770 |
|---|
| Protein GI | 268317051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.926199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGGA TCAACCTGAA ACGCCATCTG CTGATCGCCA CCGGATTGCT GGTAGTGGCG
ATCGGGGTCG TCGTCCTGCG CTATCGGGAC ACCTTTGGCG TGATGCTGGA CAATCTGCGG
GCCATGCGAG AGGGCCGCGC GCTGGCCGAA ACGTTGCGCA GTCCGCAGGA CCTGCTCGCC
TATCTGCTGG ATCACCCGAC ACAGGCTTCG CTGGTGGTCT TTGACGTCAC GGCGCCGGAC
TCCGGGCTCT ACTTCCAGCC GGAGGTGGCG CGGCCGGTGG CCGGACTCCC CCGACTGCTG
CTGCTGGCCG GCTATGCCGA AGCGGTGGCG CAGGGCGAGC TGGACCCGGA CGAACCGATC
GCCCGCCAGG CGCTCGACCG GTACGTGTTG CCATCGCTGG GCGCGCAGGT GCACACGCAT
GCCCTCTCGC TGCTGCCGGA CACCGGCGAT ACACTCCCCC TGTGGCAGGT CGTGCAGCTC
CTGCTGGAAG GCAACGATCC GGCCGCGCAC GACTACCTGC TGCTGCGTCT GGGGCAGGCT
TCGCTGGCCA CGCTGCCGGA GCGATTCGGT GTGCCGACGC TGGAACCGCC GCGGCCGCTC
CTGGGGCTTT TTCTGAGCTG GCATGCCATG CCGGCGCTGG AGGGTCGCCG TACCGAGCCC
TTTGCACTGA CGCAGGCCGT CGTGCGCGAT GCACGTCTGC ATGATGCGCT GGCAACCCAT
CTGGAGCAGC AGGGCTCCGG CCTGAGTCTG TGGGACCAGC GCGATCGGGC GCAGGCTACC
TACCCCCGTG GTACGGCGCA GGGTTATGCC GCATTGCTTC GGCGTATTGC GACCGACAGC
TCGGCCTGGG GACGCACCAT GCGTGGCTAT CTGGAGCGTA CGCTACCCGA CACGTTGCAG
ACCAGCCTGA AGGTGCTGGC CGTCGAAAGC GGGCTGTTTC CGGGGCTGGT CAGCGTGGCC
GCCTATGCCC GGCGGCACGA TCGGCCCGGG GTGCGCGTGG CGGTGCTGCT GATGGACGCC
GTTCCCATGG CCGTGCTCTA CCACCTGGCC CAGACGCGCC TCGAACAGGG ACTGGTGTTG
CAATTGCTGG GCGATGACGC TTTCTTCGAA CAGGCCCGTG GACGCCTGCA CACGACAGCA
CCCCTTGCGC AGGCTACCGG GATGGGCAGG TAA
|
|---|
| Protein sequence | MAGINLKRHL LIATGLLVVA IGVVVLRYRD TFGVMLDNLR AMREGRALAE TLRSPQDLLA
YLLDHPTQAS LVVFDVTAPD SGLYFQPEVA RPVAGLPRLL LLAGYAEAVA QGELDPDEPI
ARQALDRYVL PSLGAQVHTH ALSLLPDTGD TLPLWQVVQL LLEGNDPAAH DYLLLRLGQA
SLATLPERFG VPTLEPPRPL LGLFLSWHAM PALEGRRTEP FALTQAVVRD ARLHDALATH
LEQQGSGLSL WDQRDRAQAT YPRGTAQGYA ALLRRIATDS SAWGRTMRGY LERTLPDTLQ
TSLKVLAVES GLFPGLVSVA AYARRHDRPG VRVAVLLMDA VPMAVLYHLA QTRLEQGLVL
QLLGDDAFFE QARGRLHTTA PLAQATGMGR
|
|---|
| |